| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is gst [H]
Identifier: 110679224
GI number: 110679224
Start: 1846137
End: 1846841
Strand: Reverse
Name: gst [H]
Synonym: RD1_1937
Alternate gene names: 110679224
Gene position: 1846841-1846137 (Counterclockwise)
Preceding gene: 110679225
Following gene: 110679223
Centisome position: 44.68
GC content: 56.6
Gene sequence:
>705_bases ATGAGCCAGCCTATTGATCTGTTTTTCTGGCCCACGCCAAACGGCTGGAAGATTTCGATAGCGCTTGAGGAAATGGGCCT GCCCTATGCGACACATCTCATTGATATCGGGGCTGGCGATCAATTCGCTTCCGACTTCCTGAAAATTGCACCAAACAACA GGATGCCCGCAATCATCGACCCTGAGGGGCCAGATGGTGCGCCGGTTTCGGTTTTCGAATCCGGTGCCATCCTGCAATAC CTCGCCGGGAAAACCGGCCTTTTCGGTGGCCAGACCGCCCGCGACAGGATCGCTGTGACCGAGTGGCTGATGTGGCAGAT GGGCGGCCTTGGCCCTATGGCCGGTCAGGCGCATCATTTCTTGAAATATGCGCCGGCAATGGACCCGCCCCATGATCTGC CCTATGCGAAAAACAGGTACAGAACCGAGGTTGAAAGGCTATACGGCGTGCTGGATCGTCAACTGGCCCGCCATGAATAT GTCGCCGGTGATTTCTACTCGATTGCGGATATGTCGATTTGGGGTTGGGCATCTCTTTGGGAAGGTCAGCAGCAATCCCT TGACGATAAACCACATCTTGAACGCTGGCTTGAGACGGTGAGTGCGCGCCCCGGTGTCATCGCAGGCCGCGCGCTGCATG CGGACAAACGCGGGGATTTCCGCAAGTACAAGGCCGCGCAGGATCAACTGTTCTCAAAACCCTGA
Upstream 100 bases:
>100_bases CAAATTCGCATCCCTCAGGATTTTGACTTGTCGCATCGCACACATCAGGTAGGCTCCGGCGTGCGCCTGCCCAATGCGAC CTGCCTGCGGAGTGACAAGA
Downstream 100 bases:
>100_bases TTTCCGCAGAGTTCCTGATAAACAATACTTTTCGTCTCGATTTTCTTTGCAATGCCGGGCGTTTTCTCCAAAAGTCCCGC AATGACAGCAAAGTACAGAG
Product: glutathione S-transferase, putative
Products: HX; R-S-glutathione
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSQPIDLFFWPTPNGWKISIALEEMGLPYATHLIDIGAGDQFASDFLKIAPNNRMPAIIDPEGPDGAPVSVFESGAILQY LAGKTGLFGGQTARDRIAVTEWLMWQMGGLGPMAGQAHHFLKYAPAMDPPHDLPYAKNRYRTEVERLYGVLDRQLARHEY VAGDFYSIADMSIWGWASLWEGQQQSLDDKPHLERWLETVSARPGVIAGRALHADKRGDFRKYKAAQDQLFSKP
Sequences:
>Translated_234_residues MSQPIDLFFWPTPNGWKISIALEEMGLPYATHLIDIGAGDQFASDFLKIAPNNRMPAIIDPEGPDGAPVSVFESGAILQY LAGKTGLFGGQTARDRIAVTEWLMWQMGGLGPMAGQAHHFLKYAPAMDPPHDLPYAKNRYRTEVERLYGVLDRQLARHEY VAGDFYSIADMSIWGWASLWEGQQQSLDDKPHLERWLETVSARPGVIAGRALHADKRGDFRKYKAAQDQLFSKP >Mature_233_residues SQPIDLFFWPTPNGWKISIALEEMGLPYATHLIDIGAGDQFASDFLKIAPNNRMPAIIDPEGPDGAPVSVFESGAILQYL AGKTGLFGGQTARDRIAVTEWLMWQMGGLGPMAGQAHHFLKYAPAMDPPHDLPYAKNRYRTEVERLYGVLDRQLARHEYV AGDFYSIADMSIWGWASLWEGQQQSLDDKPHLERWLETVSARPGVIAGRALHADKRGDFRKYKAAQDQLFSKP
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=218, Percent_Identity=47.7064220183486, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI87082195, Length=226, Percent_Identity=40.2654867256637, Blast_Score=150, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6324100, Length=234, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 26201; Mature: 26070
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPIDLFFWPTPNGWKISIALEEMGLPYATHLIDIGAGDQFASDFLKIAPNNRMPAIID CCCCCEEEEECCCCCEEEEEEHHHHCCCHHHHEEECCCCHHHHHHHHHCCCCCCCCEEEC PEGPDGAPVSVFESGAILQYLAGKTGLFGGQTARDRIAVTEWLMWQMGGLGPMAGQAHHF CCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH LKYAPAMDPPHDLPYAKNRYRTEVERLYGVLDRQLARHEYVAGDFYSIADMSIWGWASLW HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH EGQQQSLDDKPHLERWLETVSARPGVIAGRALHADKRGDFRKYKAAQDQLFSKP CCHHHCCCCCHHHHHHHHHHCCCCCEEECCEECCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SQPIDLFFWPTPNGWKISIALEEMGLPYATHLIDIGAGDQFASDFLKIAPNNRMPAIID CCCCEEEEECCCCCEEEEEEHHHHCCCHHHHEEECCCCHHHHHHHHHCCCCCCCCEEEC PEGPDGAPVSVFESGAILQYLAGKTGLFGGQTARDRIAVTEWLMWQMGGLGPMAGQAHHF CCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH LKYAPAMDPPHDLPYAKNRYRTEVERLYGVLDRQLARHEYVAGDFYSIADMSIWGWASLW HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH EGQQQSLDDKPHLERWLETVSARPGVIAGRALHADKRGDFRKYKAAQDQLFSKP CCHHHCCCCCHHHHHHHHHHCCCCCEEECCEECCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]