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The map label for this gene is 110679223

Identifier: 110679223

GI number: 110679223

Start: 1845302

End: 1845997

Strand: Reverse

Name: 110679223

Synonym: RD1_1935

Alternate gene names: NA

Gene position: 1845997-1845302 (Counterclockwise)

Preceding gene: 110679224

Following gene: 110679218

Centisome position: 44.66

GC content: 58.48

Gene sequence:

>696_bases
ATGGTTTACCTTGCCGGTGCTTTTTATGTCGCAGGTATGGCGATCACAAATCAGATCATCCTGCGGCTGCTCATTCTGGC
GGGAACCTGCGTTTATCTGATCTATTATGCGATCATTGGCGACACCCCCTTGTGGGAAGCGATCTATGTGAGCCTGCTGA
TCGGCATCGCAAACATCGGAGGGTTGAGCAGCCTGATCGCGCGCCAGTCGCGTCTGGCGATCCCGCGCGCCCACGCCGAT
ATCTTCTACGACTTTCCGCGTCTGCCACCGGGGGATTTTCGCGCCCTGATGAAGCTCGCCAAACGCTATACGGTCGAACA
GGACACGCAGGTCACCCTCGAAGGCGAAATGGGCGAAAAACTGTACTTTGTACTCAAGGGCGCGACGCTTGTGCGCAAGG
GCGAGCAGGCCTTTGTCCTGCCTCCCAAGCTGTTTCTGGGTGAGGTGTCATTTCTGACCGGTGTCCCCAGTTCCGCCTCG
GCGTGGCTGGAAGAAGGCGCCGAGGTGCTGGAGTGGCAATTCGATGATCTGCGGCGCAAGTGCGCGCGCAATCCGCGCTT
CAACCTCGCGCTGGAGGCCGCGATTTCACTGGATCTGGCGGCGAAGGTTGCACGCTCCATGGGCGAATCTTCGGTTCATG
TGGACAATATTCCGTCGCCGATGGTGAATGCCTTGTCAGATGTCCGGCGCAACTAG

Upstream 100 bases:

>100_bases
ATTTTCTTTGCAATGCCGGGCGTTTTCTCCAAAAGTCCCGCAATGACAGCAAAGTACAGAGTATCAGAATATGTACGGTA
GCGTATTGACGCCGGAGCAC

Downstream 100 bases:

>100_bases
GTCTCGTCGGTGCTGTCCTCGTCGATCATGTAGCTTTGCAAGGACGTGAACTGCCACATCAGGAAGGCCATCAGCGCAAT
CGGAAAGCCAAAGGTTTCGA

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MVYLAGAFYVAGMAITNQIILRLLILAGTCVYLIYYAIIGDTPLWEAIYVSLLIGIANIGGLSSLIARQSRLAIPRAHAD
IFYDFPRLPPGDFRALMKLAKRYTVEQDTQVTLEGEMGEKLYFVLKGATLVRKGEQAFVLPPKLFLGEVSFLTGVPSSAS
AWLEEGAEVLEWQFDDLRRKCARNPRFNLALEAAISLDLAAKVARSMGESSVHVDNIPSPMVNALSDVRRN

Sequences:

>Translated_231_residues
MVYLAGAFYVAGMAITNQIILRLLILAGTCVYLIYYAIIGDTPLWEAIYVSLLIGIANIGGLSSLIARQSRLAIPRAHAD
IFYDFPRLPPGDFRALMKLAKRYTVEQDTQVTLEGEMGEKLYFVLKGATLVRKGEQAFVLPPKLFLGEVSFLTGVPSSAS
AWLEEGAEVLEWQFDDLRRKCARNPRFNLALEAAISLDLAAKVARSMGESSVHVDNIPSPMVNALSDVRRN
>Mature_231_residues
MVYLAGAFYVAGMAITNQIILRLLILAGTCVYLIYYAIIGDTPLWEAIYVSLLIGIANIGGLSSLIARQSRLAIPRAHAD
IFYDFPRLPPGDFRALMKLAKRYTVEQDTQVTLEGEMGEKLYFVLKGATLVRKGEQAFVLPPKLFLGEVSFLTGVPSSAS
AWLEEGAEVLEWQFDDLRRKCARNPRFNLALEAAISLDLAAKVARSMGESSVHVDNIPSPMVNALSDVRRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25482; Mature: 25482

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYLAGAFYVAGMAITNQIILRLLILAGTCVYLIYYAIIGDTPLWEAIYVSLLIGIANIG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GLSSLIARQSRLAIPRAHADIFYDFPRLPPGDFRALMKLAKRYTVEQDTQVTLEGEMGEK
HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCE
LYFVLKGATLVRKGEQAFVLPPKLFLGEVSFLTGVPSSASAWLEEGAEVLEWQFDDLRRK
EEEEEECCHHHCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHH
CARNPRFNLALEAAISLDLAAKVARSMGESSVHVDNIPSPMVNALSDVRRN
HHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVYLAGAFYVAGMAITNQIILRLLILAGTCVYLIYYAIIGDTPLWEAIYVSLLIGIANIG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GLSSLIARQSRLAIPRAHADIFYDFPRLPPGDFRALMKLAKRYTVEQDTQVTLEGEMGEK
HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCE
LYFVLKGATLVRKGEQAFVLPPKLFLGEVSFLTGVPSSASAWLEEGAEVLEWQFDDLRRK
EEEEEECCHHHCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHH
CARNPRFNLALEAAISLDLAAKVARSMGESSVHVDNIPSPMVNALSDVRRN
HHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA