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The map label for this gene is thiN

Identifier: 110679204

GI number: 110679204

Start: 1826741

End: 1827451

Strand: Direct

Name: thiN

Synonym: RD1_1915

Alternate gene names: NA

Gene position: 1826741-1827451 (Clockwise)

Preceding gene: 110679202

Following gene: 110679207

Centisome position: 44.2

GC content: 62.73

Gene sequence:

>711_bases
ATGACTTATACATGTGTAGAGACGACCAAACCGTTAACCCTGATTGGGGGCGGAGAGGCGACGGCGGATGATCTGGCCAG
CGCGCTGGCGCTGGCTCCGACATGCGTTGCGGCCGACAGCGGCGCGCATCTGGCGCTGGAGGCCGGTGTCGATCTGGCCG
CCGTCATCGGGGATATGGACTCAATCTCGGCCTCCGCGCGCGCGCGCATCGCGCCACAGCGGTTTCATCACATTGCGGAA
CAGGACAGCACAGATTTCGACAAGGCACTGCGGCACATCAAAGCGCCTTTGATCATCGCCGTTGGTTTCAGCGGAGGGCG
GGTCGATCATGGGCTGGCGGCCTTGAACACGTTGGTGTGCCGGGCGGACCGGCATGTGGTCTTGCTCGGTGCACAGGACA
TCATTTTCCTGTGCCCGCCCGCCTTCCAGGTGCCAACCCCCGAAGGCACACGGGTGTCGCTATTCCCGATGGGGGCGGTT
CAGGGGCGGTCTGAAGGGTTGTTCTGGCCCATCGACGGGATTGATTTTGCGCCCGGTGCGCGGACAGGTACATCAAATCG
GGCAACCGGGCCGGTATCGCTTGAAATGGATGCCCCGGTGATGTTGTGCATCATGCCGCGCGCGTTTCTTCAGCCGGTTG
TGCAGGCGCTTTCAGCGACAAGGCGATGGCCCGCTCCCGCAGCACCACATAAAGGCCCGCTGCAATCGTAA

Upstream 100 bases:

>100_bases
AACACTGTAAAGAAGCCTCAAGGAGCCACCATTCGTGTTATTCATCGTGCCAGATCATGGCAATATTGTGGCGTGTATCC
CCAATGAGCCATAAACTTTC

Downstream 100 bases:

>100_bases
TCATGATGCCAAGGCTTGCCACTGGGTTTGGAAAATCGCCAAACACGATAAAGCCGAGGATCGTGGCAAAGGGTATTTCC
AGATATTGCATCGGCGCAAG

Product: thiamine pyrophosphokinase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTYTCVETTKPLTLIGGGEATADDLASALALAPTCVAADSGAHLALEAGVDLAAVIGDMDSISASARARIAPQRFHHIAE
QDSTDFDKALRHIKAPLIIAVGFSGGRVDHGLAALNTLVCRADRHVVLLGAQDIIFLCPPAFQVPTPEGTRVSLFPMGAV
QGRSEGLFWPIDGIDFAPGARTGTSNRATGPVSLEMDAPVMLCIMPRAFLQPVVQALSATRRWPAPAAPHKGPLQS

Sequences:

>Translated_236_residues
MTYTCVETTKPLTLIGGGEATADDLASALALAPTCVAADSGAHLALEAGVDLAAVIGDMDSISASARARIAPQRFHHIAE
QDSTDFDKALRHIKAPLIIAVGFSGGRVDHGLAALNTLVCRADRHVVLLGAQDIIFLCPPAFQVPTPEGTRVSLFPMGAV
QGRSEGLFWPIDGIDFAPGARTGTSNRATGPVSLEMDAPVMLCIMPRAFLQPVVQALSATRRWPAPAAPHKGPLQS
>Mature_235_residues
TYTCVETTKPLTLIGGGEATADDLASALALAPTCVAADSGAHLALEAGVDLAAVIGDMDSISASARARIAPQRFHHIAEQ
DSTDFDKALRHIKAPLIIAVGFSGGRVDHGLAALNTLVCRADRHVVLLGAQDIIFLCPPAFQVPTPEGTRVSLFPMGAVQ
GRSEGLFWPIDGIDFAPGARTGTSNRATGPVSLEMDAPVMLCIMPRAFLQPVVQALSATRRWPAPAAPHKGPLQS

Specific function: Unknown

COG id: COG1564

COG function: function code H; Thiamine pyrophosphokinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24649; Mature: 24517

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTCVETTKPLTLIGGGEATADDLASALALAPTCVAADSGAHLALEAGVDLAAVIGDMD
CEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCEEEEECCCCHHHHHCCHH
SISASARARIAPQRFHHIAEQDSTDFDKALRHIKAPLIIAVGFSGGRVDHGLAALNTLVC
HHCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH
RADRHVVLLGAQDIIFLCPPAFQVPTPEGTRVSLFPMGAVQGRSEGLFWPIDGIDFAPGA
CCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCC
RTGTSNRATGPVSLEMDAPVMLCIMPRAFLQPVVQALSATRRWPAPAAPHKGPLQS
CCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYTCVETTKPLTLIGGGEATADDLASALALAPTCVAADSGAHLALEAGVDLAAVIGDMD
EEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCEEEEECCCCHHHHHCCHH
SISASARARIAPQRFHHIAEQDSTDFDKALRHIKAPLIIAVGFSGGRVDHGLAALNTLVC
HHCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH
RADRHVVLLGAQDIIFLCPPAFQVPTPEGTRVSLFPMGAVQGRSEGLFWPIDGIDFAPGA
CCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCC
RTGTSNRATGPVSLEMDAPVMLCIMPRAFLQPVVQALSATRRWPAPAAPHKGPLQS
CCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA