Click here to switch to the map view.

The map label for this gene is 110679161

Identifier: 110679161

GI number: 110679161

Start: 1791517

End: 1792230

Strand: Reverse

Name: 110679161

Synonym: RD1_1871

Alternate gene names: NA

Gene position: 1792230-1791517 (Counterclockwise)

Preceding gene: 110679162

Following gene: 110679160

Centisome position: 43.36

GC content: 57.84

Gene sequence:

>714_bases
TTGGTAAGAGGAGCCACTCTTGCCGCGCTCATGCTGTTCTCTGCGCCAGCCGCTCTGGCGCAGAATTGTCGCTTGGCGTT
GCTCCTTGCGATAGATGTGTCGAGCTCTGTTGATGCAGCCGAAGACAGGCTGCAACGCGGCGGCCTCGTTGCCGCGCTGA
CGGCACCCGAGGTCCAAGCCGCTTTTTTCGCGACGGATCAGTTTGTTGCGCTTGCCGCTTTTGAATGGTCGGGACGCTAT
AATCAGGAAATCCTGTTGGACTGGACGCTTATCGACAGTCAGATGACGCTGCTTGACGCGGCGGGCACGATCGCAAACAG
CACGCGCAGTCACAATGATTTTCCCACCGCAATGGGGTATGCCTTGGGCTATGGTGCGGGTATGTTGGAGCGTGCCCCTG
CCTGTTTGTACAAAACGCTGGACATGGCTGGCGATGGTCAGAACAACGAAGGGTTCAGCCCGGCGCAGGCCTATGCCGCG
TTTCCCTTTGACGACGTCACCGTCAACGGGTTGGTTGTCAACGGCGCCGATTTTGAGGCGGAAACAGGTTTGATCGCTTT
TTACAAAGGACAAGTCATGCGCGGCCCCGGCGCCTTCGTCGAGATTGCGCAGGGGTTTGAAGACTATGAACGCGCGATGC
GCCGGAAGCTTGAGCGTGAATTGACACCTCCCGTTATCGGTTCAACATCATCTCCACATGCCCCTCGGGGTTAG

Upstream 100 bases:

>100_bases
CTTTTGTGCGCTCACCTGATAATGTTTCGATCGAGCTTTTGCAGGAAGGCGACCACCTTGCGCCGGCTGAGCCATGGGCA
AGCATGGAAAATACGGGGCA

Downstream 100 bases:

>100_bases
CGATGCGGTGCGTTTTTCTTTGTATAACATGTGCGTGTCTTGCCTTGCCCTCGGGCGTCTTTGCGAATTGTCGTCAGGCA
CTTGCGATTGGCTTGGACGT

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Prot; Lipoprotein

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MVRGATLAALMLFSAPAALAQNCRLALLLAIDVSSSVDAAEDRLQRGGLVAALTAPEVQAAFFATDQFVALAAFEWSGRY
NQEILLDWTLIDSQMTLLDAAGTIANSTRSHNDFPTAMGYALGYGAGMLERAPACLYKTLDMAGDGQNNEGFSPAQAYAA
FPFDDVTVNGLVVNGADFEAETGLIAFYKGQVMRGPGAFVEIAQGFEDYERAMRRKLERELTPPVIGSTSSPHAPRG

Sequences:

>Translated_237_residues
MVRGATLAALMLFSAPAALAQNCRLALLLAIDVSSSVDAAEDRLQRGGLVAALTAPEVQAAFFATDQFVALAAFEWSGRY
NQEILLDWTLIDSQMTLLDAAGTIANSTRSHNDFPTAMGYALGYGAGMLERAPACLYKTLDMAGDGQNNEGFSPAQAYAA
FPFDDVTVNGLVVNGADFEAETGLIAFYKGQVMRGPGAFVEIAQGFEDYERAMRRKLERELTPPVIGSTSSPHAPRG
>Mature_237_residues
MVRGATLAALMLFSAPAALAQNCRLALLLAIDVSSSVDAAEDRLQRGGLVAALTAPEVQAAFFATDQFVALAAFEWSGRY
NQEILLDWTLIDSQMTLLDAAGTIANSTRSHNDFPTAMGYALGYGAGMLERAPACLYKTLDMAGDGQNNEGFSPAQAYAA
FPFDDVTVNGLVVNGADFEAETGLIAFYKGQVMRGPGAFVEIAQGFEDYERAMRRKLERELTPPVIGSTSSPHAPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25254; Mature: 25254

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGATLAALMLFSAPAALAQNCRLALLLAIDVSSSVDAAEDRLQRGGLVAALTAPEVQA
CCCCHHHHHHHHHHCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCHHE
AFFATDQFVALAAFEWSGRYNQEILLDWTLIDSQMTLLDAAGTIANSTRSHNDFPTAMGY
EEEECCCEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHH
ALGYGAGMLERAPACLYKTLDMAGDGQNNEGFSPAQAYAAFPFDDVTVNGLVVNGADFEA
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCEEEEEEEEECCCCCC
ETGLIAFYKGQVMRGPGAFVEIAQGFEDYERAMRRKLERELTPPVIGSTSSPHAPRG
CCCEEEEEECEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRGATLAALMLFSAPAALAQNCRLALLLAIDVSSSVDAAEDRLQRGGLVAALTAPEVQA
CCCCHHHHHHHHHHCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCHHE
AFFATDQFVALAAFEWSGRYNQEILLDWTLIDSQMTLLDAAGTIANSTRSHNDFPTAMGY
EEEECCCEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHH
ALGYGAGMLERAPACLYKTLDMAGDGQNNEGFSPAQAYAAFPFDDVTVNGLVVNGADFEA
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCEEEEEEEEECCCCCC
ETGLIAFYKGQVMRGPGAFVEIAQGFEDYERAMRRKLERELTPPVIGSTSSPHAPRG
CCCEEEEEECEEEECCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA