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The map label for this gene is fdxA [H]

Identifier: 110679119

GI number: 110679119

Start: 1749442

End: 1749780

Strand: Direct

Name: fdxA [H]

Synonym: RD1_1824

Alternate gene names: 110679119

Gene position: 1749442-1749780 (Clockwise)

Preceding gene: 110679118

Following gene: 110679120

Centisome position: 42.33

GC content: 54.28

Gene sequence:

>339_bases
ATGACCTACATCGTGAACGACAGCTGCATTGCATGCAAATATACCGACTGCGTCGAGGTATGCCCGGTTGACTGTTTTTA
CGAAGGTGAAAACATGCTGGTGATCCATCCCGATGAATGCATCGACTGCGGCGTGTGTGAACCCGAATGCCCCGCAGATG
CGATTCGCCCGGATACCGAACCGGACATGGAAAAGTGGGTCGAGTTCAACCGCAAGTATTCGGAGCTTTGGCCGGTCATC
ATCACCAAGAAAGATCCGCTGCCCACCGCAGAAGAACGCGATGGTGAGACCGGAAAGCTCGAAAAATACTTCTCCGAAAA
CCCGGGCGAGGGCGGCTGA

Upstream 100 bases:

>100_bases
AGGATCGTCGCACCCTTGATCTTTCTCGTGCCCGGTCTCTTGAATGATTCTAATCTGTCATTTAGCAAGCGGTTAGCTAT
TCTATTCGGAAAGAGGGTCC

Downstream 100 bases:

>100_bases
TTCGGCGGTTTTCAACGGTATTGGGACGCAACAGTCTCATTTTATTAGAAGAATTCTGAAATGACGTTACGGCAGCTTTC
GCCGGGACGAATTTTGTGAT

Product: ferredoxin II

Products: NA

Alternate protein names: Ferredoxin II; FdII [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTEPDMEKWVEFNRKYSELWPVI
ITKKDPLPTAEERDGETGKLEKYFSENPGEGG

Sequences:

>Translated_112_residues
MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTEPDMEKWVEFNRKYSELWPVI
ITKKDPLPTAEERDGETGKLEKYFSENPGEGG
>Mature_111_residues
TYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTEPDMEKWVEFNRKYSELWPVII
TKKDPLPTAEERDGETGKLEKYFSENPGEGG

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470; PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 12706; Mature: 12575

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE
CEEEECCCEEEEECCCCHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDMEKWVEFNRKYSELWPVIITKKDPLPTAEERDGETGKLEKYFSENPGEGG
CCHHHHHHHCCCHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
TYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE
EEEECCCEEEEECCCCHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDMEKWVEFNRKYSELWPVIITKKDPLPTAEERDGETGKLEKYFSENPGEGG
CCHHHHHHHCCCHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2388848; 2071578; 2277040 [H]