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The map label for this gene is hslR [H]

Identifier: 110679118

GI number: 110679118

Start: 1749011

End: 1749388

Strand: Direct

Name: hslR [H]

Synonym: RD1_1823

Alternate gene names: 110679118

Gene position: 1749011-1749388 (Clockwise)

Preceding gene: 110679117

Following gene: 110679119

Centisome position: 42.32

GC content: 60.85

Gene sequence:

>378_bases
GTGGCTGACAAGCTGCGGATCGACAAATGGCTGTGGCACGGGCGGTTTTTCAAAACCCGCTCGCTCGCCGCAACGGTTGT
TGCATCCGGTGCGGTGCGGGTGAACGGTACACGCACGCAAAAACGCAGCCATATGGTGGTTTCGGGCGATGTTCTGACCT
TCCCGCAAGGCGACGATATCCGCGTGATCCGGGTTGAGGCGCTGGGGACGCGTCGTGGCCCCGCACCCGAGGCACGGGCC
CTTTATACCGACCTGTCACCACCTGAGCGCCGCACGCGGGACGAAACGCCGAAAAACCCCTCATTTGAGGGAAAAGGTCG
TCCCACAAAGAAGGATCGTCGCACCCTTGATCTTTCTCGTGCCCGGTCTCTTGAATGA

Upstream 100 bases:

>100_bases
CGGTCAAAAATTCTCTGCCCGTCCGCCCAAGCCCGAAAAGAAAATCGACCCCGACAACCCGTTTGCGGCCGCGCTGATGG
GGTTGAAGGACGGCAAGTAA

Downstream 100 bases:

>100_bases
TTCTAATCTGTCATTTAGCAAGCGGTTAGCTATTCTATTCGGAAAGAGGGTCCATGACCTACATCGTGAACGACAGCTGC
ATTGCATGCAAATATACCGA

Product: heat shock protein, putative

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MADKLRIDKWLWHGRFFKTRSLAATVVASGAVRVNGTRTQKRSHMVVSGDVLTFPQGDDIRVIRVEALGTRRGPAPEARA
LYTDLSPPERRTRDETPKNPSFEGKGRPTKKDRRTLDLSRARSLE

Sequences:

>Translated_125_residues
MADKLRIDKWLWHGRFFKTRSLAATVVASGAVRVNGTRTQKRSHMVVSGDVLTFPQGDDIRVIRVEALGTRRGPAPEARA
LYTDLSPPERRTRDETPKNPSFEGKGRPTKKDRRTLDLSRARSLE
>Mature_124_residues
ADKLRIDKWLWHGRFFKTRSLAATVVASGAVRVNGTRTQKRSHMVVSGDVLTFPQGDDIRVIRVEALGTRRGPAPEARAL
YTDLSPPERRTRDETPKNPSFEGKGRPTKKDRRTLDLSRARSLE

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=83, Percent_Identity=44.578313253012, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14140; Mature: 14009

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKLRIDKWLWHGRFFKTRSLAATVVASGAVRVNGTRTQKRSHMVVSGDVLTFPQGDDI
CCCCCCHHHHHHCCCCCCCHHHHHHEEECCEEEECCCCCCCCCEEEEECCEEECCCCCCE
RVIRVEALGTRRGPAPEARALYTDLSPPERRTRDETPKNPSFEGKGRPTKKDRRTLDLSR
EEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHH
ARSLE
HCCCC
>Mature Secondary Structure 
ADKLRIDKWLWHGRFFKTRSLAATVVASGAVRVNGTRTQKRSHMVVSGDVLTFPQGDDI
CCCCCHHHHHHCCCCCCCHHHHHHEEECCEEEECCCCCCCCCEEEEECCEEECCCCCCE
RVIRVEALGTRRGPAPEARALYTDLSPPERRTRDETPKNPSFEGKGRPTKKDRRTLDLSR
EEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHH
ARSLE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]