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The map label for this gene is 110679116

Identifier: 110679116

GI number: 110679116

Start: 1745561

End: 1746151

Strand: Direct

Name: 110679116

Synonym: RD1_1821

Alternate gene names: NA

Gene position: 1745561-1746151 (Clockwise)

Preceding gene: 110679111

Following gene: 110679117

Centisome position: 42.23

GC content: 58.04

Gene sequence:

>591_bases
TTGGCCCGCATGGCTGTTACATTGACACATGTTATGGCCATGCACGCGCAGATTCTCAAATTTATCGTTACGGCACTTTT
TGTCGTCCCTTTGTTTTTAGCACCGGCTGAGGCACAGACCAGCGAAACCGACCTGCTGGCGCAATTGCAGACCGCGCCGG
AATCAGAGGCCAACCGGCTGGAGCGTGAACTTGCGCTGATCTGGGATCAATCCGGATCAGCCGCCATGGACCTGTTGCTC
AAACGCGGTCGCGAAGCCTTGGAGGATGAGGATAATGCCCGCGCGGTCGAACATCTCTCCGCGCTGACCGATCATGCGCC
GGAGTTTGCCGAAGGCTGGCACGCGCGCGCAACCGCCCTTTATCGCGCCGGATTGTATGGCCCGGCTTTGGATGCGCTGC
ATCAGGCGCTCTTGCTCAACCCGAACAACTTCAATGCAATCTTTGGCCTTGGGGTCATGATGCGTGAATTCGGCGATCTG
GACCGTGCGGCGCGCGCATTTGACCGCGTGCTCGAATTGCATCCGCATCACAAACGCGCGAAAGCAGCGAAAGAACAAAT
GGCCGTGCAAGGACTGGGGCAGACACTCTAG

Upstream 100 bases:

>100_bases
TCGGAACCAGCCAGTTTTTCATTCAACCGCGCAACGGCACCGTTCACAATATCGCTCATTTTATAGACCCTTTTGCCTTA
TCTGCCCGCAAGCTCTGGAA

Downstream 100 bases:

>100_bases
TCAGGTTTGAGCAAGGGAAACGCCGTGACAGGTGACAAAAGGGTCGTGGCCGTTTTAGGCCCGACCAACACAGGCAAAAC
AACCTATGCGATTGAGCGTA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MARMAVTLTHVMAMHAQILKFIVTALFVVPLFLAPAEAQTSETDLLAQLQTAPESEANRLERELALIWDQSGSAAMDLLL
KRGREALEDEDNARAVEHLSALTDHAPEFAEGWHARATALYRAGLYGPALDALHQALLLNPNNFNAIFGLGVMMREFGDL
DRAARAFDRVLELHPHHKRAKAAKEQMAVQGLGQTL

Sequences:

>Translated_196_residues
MARMAVTLTHVMAMHAQILKFIVTALFVVPLFLAPAEAQTSETDLLAQLQTAPESEANRLERELALIWDQSGSAAMDLLL
KRGREALEDEDNARAVEHLSALTDHAPEFAEGWHARATALYRAGLYGPALDALHQALLLNPNNFNAIFGLGVMMREFGDL
DRAARAFDRVLELHPHHKRAKAAKEQMAVQGLGQTL
>Mature_195_residues
ARMAVTLTHVMAMHAQILKFIVTALFVVPLFLAPAEAQTSETDLLAQLQTAPESEANRLERELALIWDQSGSAAMDLLLK
RGREALEDEDNARAVEHLSALTDHAPEFAEGWHARATALYRAGLYGPALDALHQALLLNPNNFNAIFGLGVMMREFGDLD
RAARAFDRVLELHPHHKRAKAAKEQMAVQGLGQTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21598; Mature: 21467

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMAVTLTHVMAMHAQILKFIVTALFVVPLFLAPAEAQTSETDLLAQLQTAPESEANRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
ERELALIWDQSGSAAMDLLLKRGREALEDEDNARAVEHLSALTDHAPEFAEGWHARATAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YRAGLYGPALDALHQALLLNPNNFNAIFGLGVMMREFGDLDRAARAFDRVLELHPHHKRA
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH
KAAKEQMAVQGLGQTL
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARMAVTLTHVMAMHAQILKFIVTALFVVPLFLAPAEAQTSETDLLAQLQTAPESEANRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
ERELALIWDQSGSAAMDLLLKRGREALEDEDNARAVEHLSALTDHAPEFAEGWHARATAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YRAGLYGPALDALHQALLLNPNNFNAIFGLGVMMREFGDLDRAARAFDRVLELHPHHKRA
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH
KAAKEQMAVQGLGQTL
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA