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The map label for this gene is gill [C]

Identifier: 110679084

GI number: 110679084

Start: 1714876

End: 1716309

Strand: Direct

Name: gill [C]

Synonym: RD1_1787

Alternate gene names: 110679084

Gene position: 1714876-1716309 (Clockwise)

Preceding gene: 110679083

Following gene: 110679085

Centisome position: 41.49

GC content: 58.09

Gene sequence:

>1434_bases
GTGAATATCCCCGCCTCAGAACCAAGCTTTCGCGAAAGTGTCGACCAGATGTTCAACCGGGCGGTCAGCCTGATGGACCT
GTCCCCCGGTCTGGAAGAGAAGATCCGGGTGTGCAACGCCACCTATACGGTGCGTTTTGGGGTGCGGCTGCGCGGCGAGA
TCAAGACCTTTACCGGCTATCGCTCGGTTCATTCGGAACATATGGAACCGGTCAAGGGCGGCATCCGGTTTTCCCTTGAG
GTCAATCAGGACGAGGTTGAAGCGCTTGCAGCGCTCATGACGTATAAATGCGCGCTGGTTGAAGCGCCCTTTGGTGGTTC
CAAAGGGGGGCTTTGTGTCGACCCGCGCGAGTATGAACCGCATGAGATGGAGTTGATCACCCGCCGCTTTGCCTATGAGT
TGATCAAGCGTGACCTGATCAACCCCAGCCAGAACGTGCCGGCCCCTGATATGGGAACCGGTGAACGCGAAATGGCGTGG
ATTGCGGATCAATACAAGCGGATGAACACGACGGATATCAACGGCAACGCCTGTGTGACCGGCAAGCCGCTGAATGCAGG
GGGTATTTCCGGCCGGGTGGAGGCGACGGGGCGCGGTGTGCAATACGCTCTGCGCGAGTTTTTCCGCGACGGTGAAGGGA
TGAAGAAAGCCGGGCTGACCGGCTCACTGGATGGCAAGCGCGTGATCGTTCAGGGGCTTGGCAATGTGGGCTATCATGCG
GCCAAATTCCTGAACGAAGAAGATGGTTGCGACATCGTGGGGATCATCGAACATGATGGTGCGCTTTATAACCCCAAGGG
TCTCGACGTTGACAAGATCCGTGCGTGGATTTCCAAACATGGGGGAATTGCGGGATATTCGGACCGGCATCAGGTTGCGG
ATGGGGTCAAGGTGCTGGAAGAGCCGTGCGATATCCTGATCCCTGCCGCGCTTGAGGGCGTGATCAACCTTGGAAATGCC
AAACGCATACAGGCCCCGCTGATCATTGAGGCCGCGAATGGCCCGATCACGGCGGGGGCCGATGAAATCCTGCGCGAGCG
CGGGACGGTCATCATTCCGGATATGTACGCCAATGCGGGCGGTGTCACGGTCAGCTATTTCGAGTGGGTCAAGAACCTGA
GCCATATCCGGTTTGGCCGGATGCAGCGGCGTCAGGAAGAATCGCGCCACCAGCTGTTGATCAACGAGCTGGAACGCCTG
TCCCGCGACAAGGAGCTGAACTGGGAACTAAGCCCGAATTTCAAAGAGAAATACCTGCGCGGCGCGGATGAATTGGAACT
CGTGCGCTCCGGTCTCGATGATACGATGCGCATTGCCTATCAATCCATGGCGCAGGTCTGGCATGACCGCGATGATGTGG
AGGATTTGCGCACGGCGGCCTACCTTGTGTCCATCGGCAAGGTGGCCGCAAGCTATCAAGCGAAGGGTCTGTAG

Upstream 100 bases:

>100_bases
CACTGCCTAAAAAACTGGCAATTCCACCAGTGCGGGCATAGGGTCGCGGTCATGTAGCCGTCGGCGCATGCCCGTCTTGC
AGTTCAACAGGAGAACGAAT

Downstream 100 bases:

>100_bases
GTTTTCACCTCTGGCCCATGGCCTCCATTCCATGGGCCATAGGCTGCCCCGTTTGCCGTGAAACCGGGTTTCTCGCTGCC
TCGGTCCGTCGCTGAAGGGC

Product: glutamate dehydrogenase

Products: NA

Alternate protein names: GDH [H]

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MNIPASEPSFRESVDQMFNRAVSLMDLSPGLEEKIRVCNATYTVRFGVRLRGEIKTFTGYRSVHSEHMEPVKGGIRFSLE
VNQDEVEALAALMTYKCALVEAPFGGSKGGLCVDPREYEPHEMELITRRFAYELIKRDLINPSQNVPAPDMGTGEREMAW
IADQYKRMNTTDINGNACVTGKPLNAGGISGRVEATGRGVQYALREFFRDGEGMKKAGLTGSLDGKRVIVQGLGNVGYHA
AKFLNEEDGCDIVGIIEHDGALYNPKGLDVDKIRAWISKHGGIAGYSDRHQVADGVKVLEEPCDILIPAALEGVINLGNA
KRIQAPLIIEAANGPITAGADEILRERGTVIIPDMYANAGGVTVSYFEWVKNLSHIRFGRMQRRQEESRHQLLINELERL
SRDKELNWELSPNFKEKYLRGADELELVRSGLDDTMRIAYQSMAQVWHDRDDVEDLRTAAYLVSIGKVAASYQAKGL

Sequences:

>Translated_477_residues
MNIPASEPSFRESVDQMFNRAVSLMDLSPGLEEKIRVCNATYTVRFGVRLRGEIKTFTGYRSVHSEHMEPVKGGIRFSLE
VNQDEVEALAALMTYKCALVEAPFGGSKGGLCVDPREYEPHEMELITRRFAYELIKRDLINPSQNVPAPDMGTGEREMAW
IADQYKRMNTTDINGNACVTGKPLNAGGISGRVEATGRGVQYALREFFRDGEGMKKAGLTGSLDGKRVIVQGLGNVGYHA
AKFLNEEDGCDIVGIIEHDGALYNPKGLDVDKIRAWISKHGGIAGYSDRHQVADGVKVLEEPCDILIPAALEGVINLGNA
KRIQAPLIIEAANGPITAGADEILRERGTVIIPDMYANAGGVTVSYFEWVKNLSHIRFGRMQRRQEESRHQLLINELERL
SRDKELNWELSPNFKEKYLRGADELELVRSGLDDTMRIAYQSMAQVWHDRDDVEDLRTAAYLVSIGKVAASYQAKGL
>Mature_477_residues
MNIPASEPSFRESVDQMFNRAVSLMDLSPGLEEKIRVCNATYTVRFGVRLRGEIKTFTGYRSVHSEHMEPVKGGIRFSLE
VNQDEVEALAALMTYKCALVEAPFGGSKGGLCVDPREYEPHEMELITRRFAYELIKRDLINPSQNVPAPDMGTGEREMAW
IADQYKRMNTTDINGNACVTGKPLNAGGISGRVEATGRGVQYALREFFRDGEGMKKAGLTGSLDGKRVIVQGLGNVGYHA
AKFLNEEDGCDIVGIIEHDGALYNPKGLDVDKIRAWISKHGGIAGYSDRHQVADGVKVLEEPCDILIPAALEGVINLGNA
KRIQAPLIIEAANGPITAGADEILRERGTVIIPDMYANAGGVTVSYFEWVKNLSHIRFGRMQRRQEESRHQLLINELERL
SRDKELNWELSPNFKEKYLRGADELELVRSGLDDTMRIAYQSMAQVWHDRDDVEDLRTAAYLVSIGKVAASYQAKGL

Specific function: Unknown

COG id: COG0334

COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]

Homologues:

Organism=Homo sapiens, GI4885281, Length=475, Percent_Identity=42.9473684210526, Blast_Score=373, Evalue=1e-103,
Organism=Homo sapiens, GI31377775, Length=497, Percent_Identity=41.4486921529175, Blast_Score=371, Evalue=1e-103,
Organism=Escherichia coli, GI1788059, Length=355, Percent_Identity=29.5774647887324, Blast_Score=129, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17544676, Length=494, Percent_Identity=43.5222672064777, Blast_Score=390, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6319256, Length=458, Percent_Identity=25.5458515283843, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324951, Length=424, Percent_Identity=26.4150943396226, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI45549226, Length=511, Percent_Identity=45.5968688845401, Blast_Score=421, Evalue=1e-118,
Organism=Drosophila melanogaster, GI45553475, Length=499, Percent_Identity=46.6933867735471, Blast_Score=419, Evalue=1e-117,
Organism=Drosophila melanogaster, GI24649460, Length=404, Percent_Identity=47.5247524752475, Blast_Score=365, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24649283, Length=438, Percent_Identity=43.37899543379, Blast_Score=350, Evalue=9e-97,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006095
- InterPro:   IPR006096
- InterPro:   IPR006097
- InterPro:   IPR014362
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]

EC number: =1.4.1.3 [H]

Molecular weight: Translated: 52949; Mature: 52949

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPASEPSFRESVDQMFNRAVSLMDLSPGLEEKIRVCNATYTVRFGVRLRGEIKTFTGY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEEEEECCHHHHHHH
RSVHSEHMEPVKGGIRFSLEVNQDEVEALAALMTYKCALVEAPFGGSKGGLCVDPREYEP
HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCCCCCCC
HEMELITRRFAYELIKRDLINPSQNVPAPDMGTGEREMAWIADQYKRMNTTDINGNACVT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEC
GKPLNAGGISGRVEATGRGVQYALREFFRDGEGMKKAGLTGSLDGKRVIVQGLGNVGYHA
CCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEHEECCCCCHHHH
AKFLNEEDGCDIVGIIEHDGALYNPKGLDVDKIRAWISKHGGIAGYSDRHQVADGVKVLE
HHHCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
EPCDILIPAALEGVINLGNAKRIQAPLIIEAANGPITAGADEILRERGTVIIPDMYANAG
CCHHEEEHHHHHHHHCCCCCCEECCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCC
GVTVSYFEWVKNLSHIRFGRMQRRQEESRHQLLINELERLSRDKELNWELSPNFKEKYLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHC
GADELELVRSGLDDTMRIAYQSMAQVWHDRDDVEDLRTAAYLVSIGKVAASYQAKGL
CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIPASEPSFRESVDQMFNRAVSLMDLSPGLEEKIRVCNATYTVRFGVRLRGEIKTFTGY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEEEEECCHHHHHHH
RSVHSEHMEPVKGGIRFSLEVNQDEVEALAALMTYKCALVEAPFGGSKGGLCVDPREYEP
HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCCCCCCC
HEMELITRRFAYELIKRDLINPSQNVPAPDMGTGEREMAWIADQYKRMNTTDINGNACVT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEC
GKPLNAGGISGRVEATGRGVQYALREFFRDGEGMKKAGLTGSLDGKRVIVQGLGNVGYHA
CCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEHEECCCCCHHHH
AKFLNEEDGCDIVGIIEHDGALYNPKGLDVDKIRAWISKHGGIAGYSDRHQVADGVKVLE
HHHCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
EPCDILIPAALEGVINLGNAKRIQAPLIIEAANGPITAGADEILRERGTVIIPDMYANAG
CCHHEEEHHHHHHHHCCCCCCEECCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCC
GVTVSYFEWVKNLSHIRFGRMQRRQEESRHQLLINELERLSRDKELNWELSPNFKEKYLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHC
GADELELVRSGLDDTMRIAYQSMAQVWHDRDDVEDLRTAAYLVSIGKVAASYQAKGL
CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]