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The map label for this gene is 110679056

Identifier: 110679056

GI number: 110679056

Start: 1684995

End: 1685873

Strand: Reverse

Name: 110679056

Synonym: RD1_1757

Alternate gene names: NA

Gene position: 1685873-1684995 (Counterclockwise)

Preceding gene: 110679059

Following gene: 110679055

Centisome position: 40.79

GC content: 62.68

Gene sequence:

>879_bases
ATGCCCCACCCCTTGCCACTGGAACAGGGCCGCCTGACACAGGCGCAAACCGATCAATACTGGCGCGACGGCTATCTCTT
TCCGCTGCAGGTGATGCCCGCGACTGAGGCGACCGCCCTGCGCACCGAACTTGAACGGATCGAGGCGGATTACCTTGACG
CGGGCTTGCCGCTCCCGCTGAGCACCTATAAACGTGTCAATGCGCATTGCGTGATGCCCATGGCCCATCGCATCGGATCC
GACCCGCGCATCCTGGACGTTGTCGAAGGTATCCTCGGCCCCGACATCATGATCTACGCGGTTGAATTCTTCATCAAGGA
ACCGCGCACCAACCAGATCGTCTCCATGCATCAGGACCTGACCTACTGGGGTCTCGGCGCGATTGACGGGCTGGTTACCG
CATGGCTGTCGCTCTCGCCCGCAACACCTGCCTCCGGGTGCATGGATTTCGTGCGCGGCTCACACAAGAACGCGATCCTG
CCGCATGAAGACACCTTTGCCGAGAATAACCTCCTGTCGCGCGGGCAGGAAGTGCAGGTCGATGTGGCGGACACCGACAA
GGTGCCCATCGAAATCCACCCCGGCCAGATCTCGCTCCACCACGGGCTGACGATCCACGGCTCCGGCCCCAACACCACCG
AGGATCGCCGCATTGCCGCCGTGATCCGCTACTGCGCGCCGGATGTGAAACAGCAGGTGGCCGAGGTCGATTACGCCCTC
CTCGCCCGGGGCACAGACAGGCACGGCCATTTCGCCAGCTTCCCCGCGCCATCGGCGAATTTTGCCCCCGATGCCCTCGC
GCAGTATGATGAAATCCGCGCCGCACAGGCCAAGGCGATGATGTCCGGCGCCAGGAAAAAAGGAACCCTCTACGGATGA

Upstream 100 bases:

>100_bases
ACAGAAAGGTGATTTCGCAGCCTGCAATCCAGTGTCGCAAACAGAACAGAAGCCCGCCCGCGCCAAAGCGATCATTCAAC
CACACGACAAGGAGGATCAG

Downstream 100 bases:

>100_bases
TCGACCGCGTCAGCTTTACCCAGATGAAAGACGGCACCAAGGAAGACTACGACTTCCTCACCGAACACGAAACCGCCTAT
ACCAAAGGCACCGCCGACCG

Product: phytanoyl-CoA dioxygenase, putative

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; L-Proline 4-Hydroxylase; Non-Ribosomal Peptide Synthase Related Protein; Coronamic Acid Synthetase CmaB; Phytanoyl-CoA Dioxygenase Superfamily Protein; Phytanoyl-CoA Dioxygenase PhyH Family

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MPHPLPLEQGRLTQAQTDQYWRDGYLFPLQVMPATEATALRTELERIEADYLDAGLPLPLSTYKRVNAHCVMPMAHRIGS
DPRILDVVEGILGPDIMIYAVEFFIKEPRTNQIVSMHQDLTYWGLGAIDGLVTAWLSLSPATPASGCMDFVRGSHKNAIL
PHEDTFAENNLLSRGQEVQVDVADTDKVPIEIHPGQISLHHGLTIHGSGPNTTEDRRIAAVIRYCAPDVKQQVAEVDYAL
LARGTDRHGHFASFPAPSANFAPDALAQYDEIRAAQAKAMMSGARKKGTLYG

Sequences:

>Translated_292_residues
MPHPLPLEQGRLTQAQTDQYWRDGYLFPLQVMPATEATALRTELERIEADYLDAGLPLPLSTYKRVNAHCVMPMAHRIGS
DPRILDVVEGILGPDIMIYAVEFFIKEPRTNQIVSMHQDLTYWGLGAIDGLVTAWLSLSPATPASGCMDFVRGSHKNAIL
PHEDTFAENNLLSRGQEVQVDVADTDKVPIEIHPGQISLHHGLTIHGSGPNTTEDRRIAAVIRYCAPDVKQQVAEVDYAL
LARGTDRHGHFASFPAPSANFAPDALAQYDEIRAAQAKAMMSGARKKGTLYG
>Mature_291_residues
PHPLPLEQGRLTQAQTDQYWRDGYLFPLQVMPATEATALRTELERIEADYLDAGLPLPLSTYKRVNAHCVMPMAHRIGSD
PRILDVVEGILGPDIMIYAVEFFIKEPRTNQIVSMHQDLTYWGLGAIDGLVTAWLSLSPATPASGCMDFVRGSHKNAILP
HEDTFAENNLLSRGQEVQVDVADTDKVPIEIHPGQISLHHGLTIHGSGPNTTEDRRIAAVIRYCAPDVKQQVAEVDYALL
ARGTDRHGHFASFPAPSANFAPDALAQYDEIRAAQAKAMMSGARKKGTLYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI5453884, Length=243, Percent_Identity=25.1028806584362, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI83281447, Length=156, Percent_Identity=28.8461538461538, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17544582, Length=243, Percent_Identity=26.3374485596708, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32132; Mature: 32001

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPLPLEQGRLTQAQTDQYWRDGYLFPLQVMPATEATALRTELERIEADYLDAGLPLPL
CCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCH
STYKRVNAHCVMPMAHRIGSDPRILDVVEGILGPDIMIYAVEFFIKEPRTNQIVSMHQDL
HHHHHCCCEEECHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCC
TYWGLGAIDGLVTAWLSLSPATPASGCMDFVRGSHKNAILPHEDTFAENNLLSRGQEVQV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEE
DVADTDKVPIEIHPGQISLHHGLTIHGSGPNTTEDRRIAAVIRYCAPDVKQQVAEVDYAL
EECCCCCCCEEEECCEEEEECCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
LARGTDRHGHFASFPAPSANFAPDALAQYDEIRAAQAKAMMSGARKKGTLYG
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PHPLPLEQGRLTQAQTDQYWRDGYLFPLQVMPATEATALRTELERIEADYLDAGLPLPL
CCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCH
STYKRVNAHCVMPMAHRIGSDPRILDVVEGILGPDIMIYAVEFFIKEPRTNQIVSMHQDL
HHHHHCCCEEECHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCC
TYWGLGAIDGLVTAWLSLSPATPASGCMDFVRGSHKNAILPHEDTFAENNLLSRGQEVQV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEE
DVADTDKVPIEIHPGQISLHHGLTIHGSGPNTTEDRRIAAVIRYCAPDVKQQVAEVDYAL
EECCCCCCCEEEECCEEEEECCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
LARGTDRHGHFASFPAPSANFAPDALAQYDEIRAAQAKAMMSGARKKGTLYG
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA