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The map label for this gene is 110679047

Identifier: 110679047

GI number: 110679047

Start: 1674236

End: 1674973

Strand: Reverse

Name: 110679047

Synonym: RD1_1747

Alternate gene names: NA

Gene position: 1674973-1674236 (Counterclockwise)

Preceding gene: 110679049

Following gene: 110679045

Centisome position: 40.53

GC content: 59.89

Gene sequence:

>738_bases
ATGACCAAACGTCGCATCCTCAGACTGACCGGAACAGATGTCTCCGAGTTTCTTCAGGGCCTGATCACGAACGACATCAA
AGGCGTGGAAACAGGGCTGGTCTATGCCGCCATGTTGACGCCGCAAGGCAAGTTTCTGGCCGACTTCTTTATTTGCAGAT
CGGGCGACGCCATGCTGATCGACGTTGCCGAAAGTCATGGCGATATGCTGATGCAACGGTTGAACATGTATAAGTTACGC
GCCGATGTCACCATTGAGGCGACAGATCTGCATTTGCACCGTGGCCTCGGCGATCCGCCTGAAGGAGCGATGGCAGACCC
GCGTCATCCCGCCCTTGGCTGGCGTCGCTATGCTGACGCGCCACAGACAGATGACAGCACCGACTGGACCGCCCTGCGGG
TGGAACATCAGATCCCGGAAGCCGGAATTGAACTGACGCCGGACACCTTCATCCTTGAGGTCGGATTTGAACGCATCGCG
GGCGTTGATTTTCGCAAGGGCTGTTATGTCGGGCAGGAAGTCACCGCCCGCATGAAGCACAAGACCGAATTGCGCAAAGG
CCTTGCGCAGGTTTCGATCGCGGGTCCGGCGGAGCCGGGTGCGGAAATCACTGCGAATGGAAAACCAGCCGGCGTGCTGC
ACAGCCGTGCGGGCGACAGGGCACTGGCCTACCTGCGCTATGACCGTGCAACGGGGCCAATGCAGGCGGGCGCGGCGGAA
GTGCACCGCATCGCCTGA

Upstream 100 bases:

>100_bases
TGTCGGAATAATCACCGAAATCGGTGCGCGCATTCAGCTACCTCTTCAAACTTGCGGCTGCATTGCTATATGCCTGTCAT
ACGTTAACAAAGAGGCCCCC

Downstream 100 bases:

>100_bases
CCCCGCGATGTGAGGCCCGGCGCGCGATGCCAGGACGCTCACGCGCGTTCGGAGTATTCCATGGTCTCGGTGTTGACCAC
GATATTCTCATCCTGCCCGA

Product: aminomethyl transferase family protein, putative

Products: NA

Alternate protein names: Aminomethyltransferase; Aminomethyl Transferase Family Protein; Glycine Cleavage T-Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Aminomethyltransferase Protein; Glycine Cleavage T-Protein Barrel; Aminomethyltransferase Family Protein; Glycine Cleavage T-Protein C-Terminal Barrel; Aminomethyl Transferase; TRNA-Modifying Protein YgfZ; Aminomethyltransferase Related GcvT; Large Exoprotein; GcvT-Like Aminomethyltransferase

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTKRRILRLTGTDVSEFLQGLITNDIKGVETGLVYAAMLTPQGKFLADFFICRSGDAMLIDVAESHGDMLMQRLNMYKLR
ADVTIEATDLHLHRGLGDPPEGAMADPRHPALGWRRYADAPQTDDSTDWTALRVEHQIPEAGIELTPDTFILEVGFERIA
GVDFRKGCYVGQEVTARMKHKTELRKGLAQVSIAGPAEPGAEITANGKPAGVLHSRAGDRALAYLRYDRATGPMQAGAAE
VHRIA

Sequences:

>Translated_245_residues
MTKRRILRLTGTDVSEFLQGLITNDIKGVETGLVYAAMLTPQGKFLADFFICRSGDAMLIDVAESHGDMLMQRLNMYKLR
ADVTIEATDLHLHRGLGDPPEGAMADPRHPALGWRRYADAPQTDDSTDWTALRVEHQIPEAGIELTPDTFILEVGFERIA
GVDFRKGCYVGQEVTARMKHKTELRKGLAQVSIAGPAEPGAEITANGKPAGVLHSRAGDRALAYLRYDRATGPMQAGAAE
VHRIA
>Mature_244_residues
TKRRILRLTGTDVSEFLQGLITNDIKGVETGLVYAAMLTPQGKFLADFFICRSGDAMLIDVAESHGDMLMQRLNMYKLRA
DVTIEATDLHLHRGLGDPPEGAMADPRHPALGWRRYADAPQTDDSTDWTALRVEHQIPEAGIELTPDTFILEVGFERIAG
VDFRKGCYVGQEVTARMKHKTELRKGLAQVSIAGPAEPGAEITANGKPAGVLHSRAGDRALAYLRYDRATGPMQAGAAEV
HRIA

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=287, Percent_Identity=28.9198606271777, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71985951, Length=229, Percent_Identity=28.82096069869, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24645123, Length=272, Percent_Identity=26.8382352941176, Blast_Score=84, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26808; Mature: 26677

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRRILRLTGTDVSEFLQGLITNDIKGVETGLVYAAMLTPQGKFLADFFICRSGDAMLI
CCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCHHHHEEEECCCCEEEE
DVAESHGDMLMQRLNMYKLRADVTIEATDLHLHRGLGDPPEGAMADPRHPALGWRRYADA
EECHHHHHHHHHHHHHHEEEECEEEEEEEEHEECCCCCCCCCCCCCCCCCCCCHHHHCCC
PQTDDSTDWTALRVEHQIPEAGIELTPDTFILEVGFERIAGVDFRKGCYVGQEVTARMKH
CCCCCCCCEEEEEEECCCCCCCCEECCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHH
KTELRKGLAQVSIAGPAEPGAEITANGKPAGVLHSRAGDRALAYLRYDRATGPMQAGAAE
HHHHHHHHHEEEECCCCCCCCEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCHHH
VHRIA
HHHCC
>Mature Secondary Structure 
TKRRILRLTGTDVSEFLQGLITNDIKGVETGLVYAAMLTPQGKFLADFFICRSGDAMLI
CCCEEEEEECCCHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCHHHHEEEECCCCEEEE
DVAESHGDMLMQRLNMYKLRADVTIEATDLHLHRGLGDPPEGAMADPRHPALGWRRYADA
EECHHHHHHHHHHHHHHEEEECEEEEEEEEHEECCCCCCCCCCCCCCCCCCCCHHHHCCC
PQTDDSTDWTALRVEHQIPEAGIELTPDTFILEVGFERIAGVDFRKGCYVGQEVTARMKH
CCCCCCCCEEEEEEECCCCCCCCEECCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHH
KTELRKGLAQVSIAGPAEPGAEITANGKPAGVLHSRAGDRALAYLRYDRATGPMQAGAAE
HHHHHHHHHEEEECCCCCCCCEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCHHH
VHRIA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA