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The map label for this gene is 110679038

Identifier: 110679038

GI number: 110679038

Start: 1666355

End: 1667605

Strand: Reverse

Name: 110679038

Synonym: RD1_1737

Alternate gene names: NA

Gene position: 1667605-1666355 (Counterclockwise)

Preceding gene: 110679039

Following gene: 110679036

Centisome position: 40.35

GC content: 60.19

Gene sequence:

>1251_bases
ATGATATTTCGTCTTGCCTTTTGCTCCATGGCCGCGCGCGCCCTGACCGTCACGATGACGGTGATTGCCATCGCTTTATC
CGTGGCGTTGTTTCTGGGTGTGGAAAAGGTACGCACCGGAGCCAAGGCGAGTTTTGCGGATACGATTTCCGGCACCGACC
TGATCGTGGGTGCGCGGTCGGGATCGGTGCAACTGCTGCTCTACTCCGTGTTTCGCATCGGCAATGCGACCAATAACCTG
ACCTGGGAAAGCTACAGCGACATCGCCGCGCGTCCCGAAGTCGACTGGATCGTGCCGATCTCTCTGGGCGACAGCCATCG
CCAGTTTCGCGTGATGGGCACCACCACCGAATTCTTTGAGCGTTACAAATACCGCTCAGGCCGGTCGCTGACCCTTGGCG
ACGGGGCGATCATGTCCGACCTGTTTGACGCGGTCATCGGGGCGGATGTGGCAGCGACCCTGAACTACAACGTTGGCGAT
CCGATCGTGGTGGCGCATGGTCTGGCCTCTTTCACCAACCACGATGACCAGCCTTTTCGCATCTCGGGTATTCTGGAGAA
GACCGGAACACCCGTGGATCGCACCGTAATCGTGAGCCTGCGTGCGATCGAGGCAATCCACGTGGACTGGGCCAGCGGGG
CCAGAATTCAGGGACAATCCACGCCTGTTGAGGTGATCCGACAGATGGACCTGCAACCACAGGCCGTCACCGCAGCGTTG
ATCGGAGTCAACAGTCGTCTTCAGGTGTTCAGCCTGCAACGGGCGATCAACGAATACCCGCAGGAACCTCTGCTGGCCAT
TTTGCCCGGCGTCGCCCTGCAAGAACTGTGGCAGATTGTCGGCATCGCCGAAACCGCCCTGATTGCCGTTTCCAGCATGG
TCATCATCACGGCTTTGATCGGCATGATGGCGACGATTTTCTCCAGCCTCAACGAACGCCGCCGCGAAATGGCGATATTC
CGCGCGATGGGCGCGCGCCCCCGGATCGTGCTGGGCATGCTGGTGCTCGAAGCGACCCTTATGGCGGCACTCGGGGCTGC
CCTGGGCCTCTTGTTGCTTTATGCGGGGCTTGTTGTGGCGCAGCCGATGGTCGATCGCGCCTTTGGCCTCTGGCTGCCCA
TCGAAGCACCGACCCTGCGCGAACTTTGGGTTTTGCTGGGCGTGGTCGCTGCTGGCGCAATTGTGAGCCTGATCCCCGCA
CTCAGGGCTTACAGAATGTCACTCGCAGATGGTATGATGGTCCGGATCTGA

Upstream 100 bases:

>100_bases
ATACCGCGATCCTGATGGTCAGCCACGATGCACGGCTGGCCTCGCAATTCGATCACGTGGTGGAAATGTCCGATATCGCC
TCAACGCTGGCAGAGCCTGT

Downstream 100 bases:

>100_bases
GGCCGACTGAAAAAAGGTATCGCATATGAACTTGTCCCGCCGCAGCCTTATCACCACCGCAACCGCCAGCGTTTTCTGGC
CGCACACGGCTTTTGCGCGC

Product: peptide ABC transporter, permease component, putative

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC Transporter Permease; ABC-Type Transport System Permease Component; Peptide ABC Transporter Permease Component; Transmembrane Protein; Transmembrane Transporter Component; ABC Transporter Membrane Protein; Permease Component Protein; ABC Transporter Permease Protein; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Transporter Transmembrane Permease; ABC-Type Transport System Permease

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MIFRLAFCSMAARALTVTMTVIAIALSVALFLGVEKVRTGAKASFADTISGTDLIVGARSGSVQLLLYSVFRIGNATNNL
TWESYSDIAARPEVDWIVPISLGDSHRQFRVMGTTTEFFERYKYRSGRSLTLGDGAIMSDLFDAVIGADVAATLNYNVGD
PIVVAHGLASFTNHDDQPFRISGILEKTGTPVDRTVIVSLRAIEAIHVDWASGARIQGQSTPVEVIRQMDLQPQAVTAAL
IGVNSRLQVFSLQRAINEYPQEPLLAILPGVALQELWQIVGIAETALIAVSSMVIITALIGMMATIFSSLNERRREMAIF
RAMGARPRIVLGMLVLEATLMAALGAALGLLLLYAGLVVAQPMVDRAFGLWLPIEAPTLRELWVLLGVVAAGAIVSLIPA
LRAYRMSLADGMMVRI

Sequences:

>Translated_416_residues
MIFRLAFCSMAARALTVTMTVIAIALSVALFLGVEKVRTGAKASFADTISGTDLIVGARSGSVQLLLYSVFRIGNATNNL
TWESYSDIAARPEVDWIVPISLGDSHRQFRVMGTTTEFFERYKYRSGRSLTLGDGAIMSDLFDAVIGADVAATLNYNVGD
PIVVAHGLASFTNHDDQPFRISGILEKTGTPVDRTVIVSLRAIEAIHVDWASGARIQGQSTPVEVIRQMDLQPQAVTAAL
IGVNSRLQVFSLQRAINEYPQEPLLAILPGVALQELWQIVGIAETALIAVSSMVIITALIGMMATIFSSLNERRREMAIF
RAMGARPRIVLGMLVLEATLMAALGAALGLLLLYAGLVVAQPMVDRAFGLWLPIEAPTLRELWVLLGVVAAGAIVSLIPA
LRAYRMSLADGMMVRI
>Mature_416_residues
MIFRLAFCSMAARALTVTMTVIAIALSVALFLGVEKVRTGAKASFADTISGTDLIVGARSGSVQLLLYSVFRIGNATNNL
TWESYSDIAARPEVDWIVPISLGDSHRQFRVMGTTTEFFERYKYRSGRSLTLGDGAIMSDLFDAVIGADVAATLNYNVGD
PIVVAHGLASFTNHDDQPFRISGILEKTGTPVDRTVIVSLRAIEAIHVDWASGARIQGQSTPVEVIRQMDLQPQAVTAAL
IGVNSRLQVFSLQRAINEYPQEPLLAILPGVALQELWQIVGIAETALIAVSSMVIITALIGMMATIFSSLNERRREMAIF
RAMGARPRIVLGMLVLEATLMAALGAALGLLLLYAGLVVAQPMVDRAFGLWLPIEAPTLRELWVLLGVVAAGAIVSLIPA
LRAYRMSLADGMMVRI

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44871; Mature: 44871

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFRLAFCSMAARALTVTMTVIAIALSVALFLGVEKVRTGAKASFADTISGTDLIVGARS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCC
GSVQLLLYSVFRIGNATNNLTWESYSDIAARPEVDWIVPISLGDSHRQFRVMGTTTEFFE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHH
RYKYRSGRSLTLGDGAIMSDLFDAVIGADVAATLNYNVGDPIVVAHGLASFTNHDDQPFR
HHHHCCCCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEE
ISGILEKTGTPVDRTVIVSLRAIEAIHVDWASGARIQGQSTPVEVIRQMDLQPQAVTAAL
EEEEHHHCCCCCCHHHEEEHHHHHEEEEECCCCCEECCCCCHHHHHHHCCCCHHHHHHHH
IGVNSRLQVFSLQRAINEYPQEPLLAILPGVALQELWQIVGIAETALIAVSSMVIITALI
HCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMMATIFSSLNERRREMAIFRAMGARPRIVLGMLVLEATLMAALGAALGLLLLYAGLVVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPMVDRAFGLWLPIEAPTLRELWVLLGVVAAGAIVSLIPALRAYRMSLADGMMVRI
HHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
>Mature Secondary Structure
MIFRLAFCSMAARALTVTMTVIAIALSVALFLGVEKVRTGAKASFADTISGTDLIVGARS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCC
GSVQLLLYSVFRIGNATNNLTWESYSDIAARPEVDWIVPISLGDSHRQFRVMGTTTEFFE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHH
RYKYRSGRSLTLGDGAIMSDLFDAVIGADVAATLNYNVGDPIVVAHGLASFTNHDDQPFR
HHHHCCCCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEE
ISGILEKTGTPVDRTVIVSLRAIEAIHVDWASGARIQGQSTPVEVIRQMDLQPQAVTAAL
EEEEHHHCCCCCCHHHEEEHHHHHEEEEECCCCCEECCCCCHHHHHHHCCCCHHHHHHHH
IGVNSRLQVFSLQRAINEYPQEPLLAILPGVALQELWQIVGIAETALIAVSSMVIITALI
HCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMMATIFSSLNERRREMAIFRAMGARPRIVLGMLVLEATLMAALGAALGLLLLYAGLVVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPMVDRAFGLWLPIEAPTLRELWVLLGVVAAGAIVSLIPALRAYRMSLADGMMVRI
HHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA