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The map label for this gene is rrf [H]

Identifier: 110678994

GI number: 110678994

Start: 1624370

End: 1624813

Strand: Reverse

Name: rrf [H]

Synonym: RD1_1691

Alternate gene names: 110678994

Gene position: 1624813-1624370 (Counterclockwise)

Preceding gene: 110679002

Following gene: 110678993

Centisome position: 39.31

GC content: 60.81

Gene sequence:

>444_bases
ATGCAACTGGACAAATTCACCGACTATGCCCTGCGCATCCTGATGACGCTGGCGGTGCGCGCACCGGCACGGGTTGCCAC
GTCAGAAATAGCGACGCTGTTCGGGCTATCGGAAAACCATTTGTCCAAGGTTTCGACACAGCTTGTCCGTGAGGGTTTTG
TCCTTTCGGAGCGGGGACGCAATGGCGGCCTGACCCTCGCGCGCGCGCCCGAGCGCATTCTCGTCGGCGCGGTTGTGCGC
ACGATGACGCGCAAGGCACATGTGGTGGAGTGTTTTGGCACGGACAAATCCTGCCTGATCCTCCCCTCCTGCGGATTGCG
CCAGCCCTTGGCAGAGGCGCAAGAGGCTTTCTTTGCGACGCTGGATCACTATACGCTGGCTGACGTGACACGGTCACGGC
ACGGCCTTGGCGCCTTGCTGAACCCACAATTCGCCAATACCTGA

Upstream 100 bases:

>100_bases
AGCTTCGGATAGTGACATCAGTTTGCCCCTTTACCAGATAATTCACCTGAATATTAACTAACGCTTTTAAATACGTATTG
TAAATGCTAATTATAAATTC

Downstream 100 bases:

>100_bases
GGCGGGCATGATCCGGGCGACGGTATGGGCAACGGTGATCAAAGCGCAGGCCGTTTTGCCAAACACTTGATGACCGCAAA
CCCATTCAGTTTATTCGGCT

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MQLDKFTDYALRILMTLAVRAPARVATSEIATLFGLSENHLSKVSTQLVREGFVLSERGRNGGLTLARAPERILVGAVVR
TMTRKAHVVECFGTDKSCLILPSCGLRQPLAEAQEAFFATLDHYTLADVTRSRHGLGALLNPQFANT

Sequences:

>Translated_147_residues
MQLDKFTDYALRILMTLAVRAPARVATSEIATLFGLSENHLSKVSTQLVREGFVLSERGRNGGLTLARAPERILVGAVVR
TMTRKAHVVECFGTDKSCLILPSCGLRQPLAEAQEAFFATLDHYTLADVTRSRHGLGALLNPQFANT
>Mature_147_residues
MQLDKFTDYALRILMTLAVRAPARVATSEIATLFGLSENHLSKVSTQLVREGFVLSERGRNGGLTLARAPERILVGAVVR
TMTRKAHVVECFGTDKSCLILPSCGLRQPLAEAQEAFFATLDHYTLADVTRSRHGLGALLNPQFANT

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=141, Percent_Identity=39.7163120567376, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16070; Mature: 16070

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDKFTDYALRILMTLAVRAPARVATSEIATLFGLSENHLSKVSTQLVREGFVLSERGR
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCC
NGGLTLARAPERILVGAVVRTMTRKAHVVECFGTDKSCLILPSCGLRQPLAEAQEAFFAT
CCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHH
LDHYTLADVTRSRHGLGALLNPQFANT
HCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLDKFTDYALRILMTLAVRAPARVATSEIATLFGLSENHLSKVSTQLVREGFVLSERGR
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCC
NGGLTLARAPERILVGAVVRTMTRKAHVVECFGTDKSCLILPSCGLRQPLAEAQEAFFAT
CCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHH
LDHYTLADVTRSRHGLGALLNPQFANT
HCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA