The gene/protein map for NC_008209 is currently unavailable.
Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110678978

Identifier: 110678978

GI number: 110678978

Start: 1610609

End: 1611172

Strand: Reverse

Name: 110678978

Synonym: RD1_1675

Alternate gene names: NA

Gene position: 1611172-1610609 (Counterclockwise)

Preceding gene: 110678981

Following gene: 110678977

Centisome position: 38.98

GC content: 64.36

Gene sequence:

>564_bases
ATGTCCTGGACAGACGAACGGGTTGAACTGCTCAAGAAAATGTGGGGCGAAGGCCAGTCCGCAAGTCAGATCGCCAAGGA
ACTGGGCGGTGTGACCCGTAACGCCGTGATCGGCAAAGTGCACAGGCTGGGTCTGTCAAACCGCGCCACGACCGGCACGA
AGACCGAGACCAAAGCCAAGGCCGCGCCAAAAGCCGAGGCCAAGCCCAAGCCCGCGCCAAAACCGGCAGAACCGGCGGCA
CAAGCGGCCCCCGAACCGGCGACGCCCAAGCCCCTGCCCTCCCGCAAACAGATTATCCCCGCAGGCCAGCCCCTGCCGCC
GCAACCGTCCGCCAATGAAATCAGCCCGGAGGCCCTCGCCAAGGTGTCGGCCATCGAGAAGAAAGCGAAAAAGCTGACGC
TGATGGAGTTGACCGAACGGACCTGCAAATGGCCCGTCGGCGACCCTGCGACCGACGATTTCTGGTTTTGCGGCCTGACG
GTGCAGCAGGGCAAACCCTATTGCGAGGCGCATGTGGGCGTTGCCTTTCAGCCGATGTCGTCGCGCCGGGACCGCCGCCG
CTGA

Upstream 100 bases:

>100_bases
TCGCGGCTTGTATCTCCGGGTCCAGTCTCTAGAATAGAGGACTACGCTGACACGGTGGCGGTCCTGATCCTTGGGCCGCC
TTTTGAATTGGGGAATGCTG

Downstream 100 bases:

>100_bases
TACGGCCGGTGGCAAAGCGCCAGCGCCACCCTCCTGAAATATCGAAAACGCAAAGGTGAGTTGCGCGTGGCTTCGGGTCA
GGTATGAACCGTTGGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Global Cell Cycle Regulator GcrA; GcrA Cell Cycle Regulator Superfamily; Cell Cycle Regulator GcrA; Gcra Cell Cycle Regulator

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRATTGTKTETKAKAAPKAEAKPKPAPKPAEPAA
QAAPEPATPKPLPSRKQIIPAGQPLPPQPSANEISPEALAKVSAIEKKAKKLTLMELTERTCKWPVGDPATDDFWFCGLT
VQQGKPYCEAHVGVAFQPMSSRRDRRR

Sequences:

>Translated_187_residues
MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRATTGTKTETKAKAAPKAEAKPKPAPKPAEPAA
QAAPEPATPKPLPSRKQIIPAGQPLPPQPSANEISPEALAKVSAIEKKAKKLTLMELTERTCKWPVGDPATDDFWFCGLT
VQQGKPYCEAHVGVAFQPMSSRRDRRR
>Mature_186_residues
SWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRATTGTKTETKAKAAPKAEAKPKPAPKPAEPAAQ
AAPEPATPKPLPSRKQIIPAGQPLPPQPSANEISPEALAKVSAIEKKAKKLTLMELTERTCKWPVGDPATDDFWFCGLTV
QQGKPYCEAHVGVAFQPMSSRRDRRR

Specific function: Unknown

COG id: COG5352

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20252; Mature: 20120

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRATTGTKTETKAK
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AAPKAEAKPKPAPKPAEPAAQAAPEPATPKPLPSRKQIIPAGQPLPPQPSANEISPEALA
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KVSAIEKKAKKLTLMELTERTCKWPVGDPATDDFWFCGLTVQQGKPYCEAHVGVAFQPMS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEECCHH
SRRDRRR
HHHCCCC
>Mature Secondary Structure 
SWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRATTGTKTETKAK
CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AAPKAEAKPKPAPKPAEPAAQAAPEPATPKPLPSRKQIIPAGQPLPPQPSANEISPEALA
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KVSAIEKKAKKLTLMELTERTCKWPVGDPATDDFWFCGLTVQQGKPYCEAHVGVAFQPMS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEECCHH
SRRDRRR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA