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The map label for this gene is 110678969

Identifier: 110678969

GI number: 110678969

Start: 1600340

End: 1600864

Strand: Direct

Name: 110678969

Synonym: RD1_1665

Alternate gene names: NA

Gene position: 1600340-1600864 (Clockwise)

Preceding gene: 110678968

Following gene: 110678970

Centisome position: 38.72

GC content: 58.67

Gene sequence:

>525_bases
ATGCGTTTCCCACTTAAGATGATCGCCGTTGCGGCAACTGCGATAACCCTTGCAACCTCCGCCTTCGCGGGCGAGCAATA
TATCGACCCGACAGGCTTTGCCGTGTCCGGGTATGATGTCGTTGCCTATTTCGACCTCGATCAGGCACCCGTTGGTCAGG
ACCAGCCTGCCGCAGTGCCGGGGAACAAGAACATCACGTCCACCTATAACGGGGCGACATTCGCGTTCTCCAGCGAAGCC
AACAAAGCGCGCTTTGATGCGGACCCCGCCGCCTTTGCGCCGCAATATGACGGGCATTGCGCCTATGGTGTTTCCAAGGG
CGGAAAGGTTCCCGGCAACCCGGAACTGTGGCGCATTGTGGATGGGAAGCTCTATCTGAACATCACGGACAATGTCGTGG
GCTTCTGGGAAGAGGATATTCCCGGCAACCTGACCCTGTCTGAAAACAACTGGGTGAGCCTTGAGCCCGCCGCCGCGTCT
GATCGTGCGATACCGCAGTTCAGCAGCGCTGCTCCCGTGAACTGA

Upstream 100 bases:

>100_bases
GCGGGCCCAAGGGGTGCACCTGTGCGGGGCAAGCGGTTAAATCAGTTGACAGCGGTGCAAAAGCGCCCGTTGATGAAAAA
TGCCAGACTGGAGTATTCCG

Downstream 100 bases:

>100_bases
TGGGCCAGCTCGATCCGATCGAACAAAGCCAAAAATCCCCGTTGCGCATGTCGCGGCGGGGATTGCTCGTTCTTGCTGTT
GCGGGCGTGGCGACGGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: YHS Domain-Containing Protein; YHS Domain Family; Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRFPLKMIAVAATAITLATSAFAGEQYIDPTGFAVSGYDVVAYFDLDQAPVGQDQPAAVPGNKNITSTYNGATFAFSSEA
NKARFDADPAAFAPQYDGHCAYGVSKGGKVPGNPELWRIVDGKLYLNITDNVVGFWEEDIPGNLTLSENNWVSLEPAAAS
DRAIPQFSSAAPVN

Sequences:

>Translated_174_residues
MRFPLKMIAVAATAITLATSAFAGEQYIDPTGFAVSGYDVVAYFDLDQAPVGQDQPAAVPGNKNITSTYNGATFAFSSEA
NKARFDADPAAFAPQYDGHCAYGVSKGGKVPGNPELWRIVDGKLYLNITDNVVGFWEEDIPGNLTLSENNWVSLEPAAAS
DRAIPQFSSAAPVN
>Mature_174_residues
MRFPLKMIAVAATAITLATSAFAGEQYIDPTGFAVSGYDVVAYFDLDQAPVGQDQPAAVPGNKNITSTYNGATFAFSSEA
NKARFDADPAAFAPQYDGHCAYGVSKGGKVPGNPELWRIVDGKLYLNITDNVVGFWEEDIPGNLTLSENNWVSLEPAAAS
DRAIPQFSSAAPVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18457; Mature: 18457

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPLKMIAVAATAITLATSAFAGEQYIDPTGFAVSGYDVVAYFDLDQAPVGQDQPAAVP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCC
GNKNITSTYNGATFAFSSEANKARFDADPAAFAPQYDGHCAYGVSKGGKVPGNPELWRIV
CCCCCEEECCCEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEE
DGKLYLNITDNVVGFWEEDIPGNLTLSENNWVSLEPAAASDRAIPQFSSAAPVN
CCEEEEEEECCEEEEECCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFPLKMIAVAATAITLATSAFAGEQYIDPTGFAVSGYDVVAYFDLDQAPVGQDQPAAVP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCC
GNKNITSTYNGATFAFSSEANKARFDADPAAFAPQYDGHCAYGVSKGGKVPGNPELWRIV
CCCCCEEECCCEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEE
DGKLYLNITDNVVGFWEEDIPGNLTLSENNWVSLEPAAASDRAIPQFSSAAPVN
CCEEEEEEECCEEEEECCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA