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The map label for this gene is asmA [H]

Identifier: 110678964

GI number: 110678964

Start: 1595127

End: 1597079

Strand: Direct

Name: asmA [H]

Synonym: RD1_1660

Alternate gene names: 110678964

Gene position: 1595127-1597079 (Clockwise)

Preceding gene: 110678960

Following gene: 110678967

Centisome position: 38.59

GC content: 59.75

Gene sequence:

>1953_bases
ATGAAATGGGTTTTTCGTTTTTTCGGGCTGATCTTTGCCCTTGTGGTTTTGCTGGTCGTGACGGTGTTTTTTCTGCCAGC
GGACCGGCTGGCGCGCATCGCGACGGAGCAGCTGTCGGCGACCACGGGTCGGGATGTTGCAATCAACGGTGATGTGGCGC
TGACCTTTTGGCCTGTTTTGGGCGTCAGCGCCAATGATCTGGAGGTCGGCAATGCAGCATGGGCCGAACAGGGGCCGATG
CTGCAGGCGGCAAATGCTGCGATTGGCGTTGACGTTATGGCACTGCTGCGCGGTGACATCCGAATAACAAATGTCGAGGC
ACACAGCCCGACCATCCGGCTCGAACAGCGCCTTGACGGGCGGGCCAGCTGGGAATTTACGAACGCCGAAGACACCGCGC
AGATCACAACATCGACCGATGCGAGCACCGATGCACCCGCCGCCATGGCAGATGAAAGCCGCACGATCAGCATCGAACGG
CTGAGCGTTACAAATGCCACCTTGGTCTATGACGCCGAAGGCAGCGATCTGGTGACTTTGGCTGGTGTCGATCTGGCGCT
TGATTGGCCGGACCCGGGCGGCCCTGCCGAAATCTCGGCCACAGTCCGGCCAGCGGACGTGCCGGTCCGCATCGCGGCGC
AAATCGAGGGCTTTGGCGATTTCATCGCGGGAGAGACGCGCGGCGTCAATGCCACCGTGGCGGTGCCGTCGGGAGAATTG
AGCCTCGACGGGCGTGCCAGCACAGCCGGGGCTGTCGCGGGCGCCGTCAGTTTCAGTGCCGGTAACACCGAAGCGTTTCT
GGCCGCGCTTGGTCTTCCGGGTATTGCACTGCCGCCCAAACTCGGGGCGCAGATCGACATGCGCACGGACCTGACCCTGA
CGCCGGATCGGCAGTTGGCACTGCGTGATCTGGTCCTTGATCTGCATGGCAACCGGTTGACAGGTGCCGCCGATGTTTCC
CTGAACGGCACCCCGAATGTGAATGTGCAATTGGCGGCGGGTGATCTTGATCTGCGCCCGGTGCAGACTGCCTCGGGTTC
TTCGGGATCCTCTGTTGGGCAATCCGGTGCTGAACCGGCCTCTGACGGATGGTCGAAATCCCCGATTGATGCCAGCGCAC
TGGCCTCTTTTAACGGTGATATTGCCTTGAGCGCGAACAGCATTGATCTGGGGCAATTCAAGCTGGGCACGACGCAAACC
GTATTGCGCAACGACAATTCGCGCATGGTGTTCGAACTGCGTCAGGTCAGCGCCTATGGCGGGCAGGTCACAGGTGAATT
CGTGGTCAATAACCGCAGTGGCCTGTCGGTGGGCGGCCGGATGAATGTCGCGGGGATGCAGATGCAACCCCTGCTCAAGG
ATGCGGTTGAATTTGATCGGCTGACGGGTCAGGGCGATGTGCAACTGTCCTTTCTCGGGGCGGGCAATTCCGTGCACGCC
ATTATGAATTCGCTGTCTGGAAACGGCGGTTTGAACATCGCACGCGGCACGATTGAGGGGATCAACCTTGATCAACTGCT
GCGCGGGGGTGCCTCCAGCGGCACAACGATTTTCGATGATCTGTCGGCCACATGGAACATCAAGGACGGGGTTTTGCGCA
ACGATGACCTGTTATTGCAGTTGAAAAACTACAGCGCCTCCGGCGAGGGTCAGATCGGGTTGGGCAAGCGCACACTCAAT
TACACGGTGACACCGATTGCCCTGCGCGCCAACTCCGGGAATGGCGTGGCCATTCCGGTGCGGTTTCGCGGACCATGGTC
GGACGTGTCCATCACACCGGACCTTGAGGCGGCGCTTGATCTGAACCTTGATCAGGAGCGCAGAGACCTTGAGGATCGCG
CCAAAAGCGAAGTGTCAGAGCGCCTTGGCATCAAGCAGGAGGAGGGAAAATCCACTGAAGATGCCATCAAGGACAAAGTC
AAAGACGAATTGCTGCGCAAACTGTTCGACTAG

Upstream 100 bases:

>100_bases
AGATCGGGGCGCAGGTCTGGTGGGTTTGTGCTCATGATCTGCGCTATACTGCAGTTGTCAGAGGCTTGAAAGGCCTTGCG
TTGGCGCGGGAGTGTGCGGG

Downstream 100 bases:

>100_bases
AGCGTCTGGCGACATACTTGAAAATCACGTAACGCGTTGGAATCCCTGATTTCAGGCAGCGTTGCGTGATCCATGTTTTG
GGCATGCCGCTTTAGATCAC

Product: AsmA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MKWVFRFFGLIFALVVLLVVTVFFLPADRLARIATEQLSATTGRDVAINGDVALTFWPVLGVSANDLEVGNAAWAEQGPM
LQAANAAIGVDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDTAQITTSTDASTDAPAAMADESRTISIER
LSVTNATLVYDAEGSDLVTLAGVDLALDWPDPGGPAEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGEL
SLDGRASTAGAVAGAVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLALRDLVLDLHGNRLTGAADVS
LNGTPNVNVQLAAGDLDLRPVQTASGSSGSSVGQSGAEPASDGWSKSPIDASALASFNGDIALSANSIDLGQFKLGTTQT
VLRNDNSRMVFELRQVSAYGGQVTGEFVVNNRSGLSVGGRMNVAGMQMQPLLKDAVEFDRLTGQGDVQLSFLGAGNSVHA
IMNSLSGNGGLNIARGTIEGINLDQLLRGGASSGTTIFDDLSATWNIKDGVLRNDDLLLQLKNYSASGEGQIGLGKRTLN
YTVTPIALRANSGNGVAIPVRFRGPWSDVSITPDLEAALDLNLDQERRDLEDRAKSEVSERLGIKQEEGKSTEDAIKDKV
KDELLRKLFD

Sequences:

>Translated_650_residues
MKWVFRFFGLIFALVVLLVVTVFFLPADRLARIATEQLSATTGRDVAINGDVALTFWPVLGVSANDLEVGNAAWAEQGPM
LQAANAAIGVDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDTAQITTSTDASTDAPAAMADESRTISIER
LSVTNATLVYDAEGSDLVTLAGVDLALDWPDPGGPAEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGEL
SLDGRASTAGAVAGAVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLALRDLVLDLHGNRLTGAADVS
LNGTPNVNVQLAAGDLDLRPVQTASGSSGSSVGQSGAEPASDGWSKSPIDASALASFNGDIALSANSIDLGQFKLGTTQT
VLRNDNSRMVFELRQVSAYGGQVTGEFVVNNRSGLSVGGRMNVAGMQMQPLLKDAVEFDRLTGQGDVQLSFLGAGNSVHA
IMNSLSGNGGLNIARGTIEGINLDQLLRGGASSGTTIFDDLSATWNIKDGVLRNDDLLLQLKNYSASGEGQIGLGKRTLN
YTVTPIALRANSGNGVAIPVRFRGPWSDVSITPDLEAALDLNLDQERRDLEDRAKSEVSERLGIKQEEGKSTEDAIKDKV
KDELLRKLFD
>Mature_650_residues
MKWVFRFFGLIFALVVLLVVTVFFLPADRLARIATEQLSATTGRDVAINGDVALTFWPVLGVSANDLEVGNAAWAEQGPM
LQAANAAIGVDVMALLRGDIRITNVEAHSPTIRLEQRLDGRASWEFTNAEDTAQITTSTDASTDAPAAMADESRTISIER
LSVTNATLVYDAEGSDLVTLAGVDLALDWPDPGGPAEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGEL
SLDGRASTAGAVAGAVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLALRDLVLDLHGNRLTGAADVS
LNGTPNVNVQLAAGDLDLRPVQTASGSSGSSVGQSGAEPASDGWSKSPIDASALASFNGDIALSANSIDLGQFKLGTTQT
VLRNDNSRMVFELRQVSAYGGQVTGEFVVNNRSGLSVGGRMNVAGMQMQPLLKDAVEFDRLTGQGDVQLSFLGAGNSVHA
IMNSLSGNGGLNIARGTIEGINLDQLLRGGASSGTTIFDDLSATWNIKDGVLRNDDLLLQLKNYSASGEGQIGLGKRTLN
YTVTPIALRANSGNGVAIPVRFRGPWSDVSITPDLEAALDLNLDQERRDLEDRAKSEVSERLGIKQEEGKSTEDAIKDKV
KDELLRKLFD

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=672, Percent_Identity=21.4285714285714, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 68336; Mature: 68336

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWVFRFFGLIFALVVLLVVTVFFLPADRLARIATEQLSATTGRDVAINGDVALTFWPVL
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEC
GVSANDLEVGNAAWAEQGPMLQAANAAIGVDVMALLRGDIRITNVEAHSPTIRLEQRLDG
CCCCCCEECCCCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCC
RASWEFTNAEDTAQITTSTDASTDAPAAMADESRTISIERLSVTNATLVYDAEGSDLVTL
CCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEE
AGVDLALDWPDPGGPAEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGEL
ECEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECCCCE
SLDGRASTAGAVAGAVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLA
EECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCHHHH
LRDLVLDLHGNRLTGAADVSLNGTPNVNVQLAAGDLDLRPVQTASGSSGSSVGQSGAEPA
HHHHHHHCCCCEECCEEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCC
SDGWSKSPIDASALASFNGDIALSANSIDLGQFKLGTTQTVLRNDNSRMVFELRQVSAYG
CCCCCCCCCCHHHHHCCCCCEEEEECCEECCEEECCCCEEEEECCCCEEEEEEEEHHHCC
GQVTGEFVVNNRSGLSVGGRMNVAGMQMQPLLKDAVEFDRLTGQGDVQLSFLGAGNSVHA
CEEEEEEEEECCCCCEECCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH
IMNSLSGNGGLNIARGTIEGINLDQLLRGGASSGTTIFDDLSATWNIKDGVLRNDDLLLQ
HHHHCCCCCCCEEEECEECCCCHHHHHCCCCCCCCEEEECCCCEEECCCCEEECCCEEEE
LKNYSASGEGQIGLGKRTLNYTVTPIALRANSGNGVAIPVRFRGPWSDVSITPDLEAALD
EECCCCCCCCCEEECCEEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEECCCCHHEEE
LNLDQERRDLEDRAKSEVSERLGIKQEEGKSTEDAIKDKVKDELLRKLFD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWVFRFFGLIFALVVLLVVTVFFLPADRLARIATEQLSATTGRDVAINGDVALTFWPVL
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEC
GVSANDLEVGNAAWAEQGPMLQAANAAIGVDVMALLRGDIRITNVEAHSPTIRLEQRLDG
CCCCCCEECCCCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCC
RASWEFTNAEDTAQITTSTDASTDAPAAMADESRTISIERLSVTNATLVYDAEGSDLVTL
CCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEE
AGVDLALDWPDPGGPAEISATVRPADVPVRIAAQIEGFGDFIAGETRGVNATVAVPSGEL
ECEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECCCCE
SLDGRASTAGAVAGAVSFSAGNTEAFLAALGLPGIALPPKLGAQIDMRTDLTLTPDRQLA
EECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCHHHH
LRDLVLDLHGNRLTGAADVSLNGTPNVNVQLAAGDLDLRPVQTASGSSGSSVGQSGAEPA
HHHHHHHCCCCEECCEEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCC
SDGWSKSPIDASALASFNGDIALSANSIDLGQFKLGTTQTVLRNDNSRMVFELRQVSAYG
CCCCCCCCCCHHHHHCCCCCEEEEECCEECCEEECCCCEEEEECCCCEEEEEEEEHHHCC
GQVTGEFVVNNRSGLSVGGRMNVAGMQMQPLLKDAVEFDRLTGQGDVQLSFLGAGNSVHA
CEEEEEEEEECCCCCEECCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH
IMNSLSGNGGLNIARGTIEGINLDQLLRGGASSGTTIFDDLSATWNIKDGVLRNDDLLLQ
HHHHCCCCCCCEEEECEECCCCHHHHHCCCCCCCCEEEECCCCEEECCCCEEECCCEEEE
LKNYSASGEGQIGLGKRTLNYTVTPIALRANSGNGVAIPVRFRGPWSDVSITPDLEAALD
EECCCCCCCCCEEECCEEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEECCCCHHEEE
LNLDQERRDLEDRAKSEVSERLGIKQEEGKSTEDAIKDKVKDELLRKLFD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]