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The map label for this gene is 110678962

Identifier: 110678962

GI number: 110678962

Start: 1593377

End: 1593619

Strand: Reverse

Name: 110678962

Synonym: RD1_1658

Alternate gene names: NA

Gene position: 1593619-1593377 (Counterclockwise)

Preceding gene: 110678963

Following gene: 110678961

Centisome position: 38.56

GC content: 56.38

Gene sequence:

>243_bases
ATGTCCGACACGCCCAAAATCGCCCAGACCGCCCCCTACCCGGTCGACGTCATTGCCGGTAAATCATATTTCTGGTGCAC
CTGCGGTCAGTCGTCCAAACAGCCATTTTGTGACGGCTCGCACAAGGACACGGGCTTTGCGCCAATGAAATACGAAGCCG
AAGAAGACCGTAAGGTGTTTTTCTGCGGCTGCAAAGCGACCAGCAAGGCCCCCATGTGCGACGGCTCACACAGCAAACTG
TGA

Upstream 100 bases:

>100_bases
AATACGACCTGTGGGGACGCCTTGCGCCATCGGCGTAACCGCGGAGTTTGCCTTTGACGCGGCTGCGCTATCTTTTGCAC
ACAGCAAGGAGAACCCAGCC

Downstream 100 bases:

>100_bases
TACTGGCGCGCCGGCCTGCGGTGAATTGTCCGCCTCTTTGGTCAATGCAGCGATGGCACCTACATCTGGTGCATGAGCGA
GACCGACGACAATAAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger CDGSH-Type Domain Protein; Glutamate Synthase; Iron Sulfur Domain-Containing CDGSH-Type; Zinc Finger CDGSH-Type Domain-Containing Protein; Glutamate Synthase Domain-Containing Protein; CDGSH-Type Iron Sulfur Domain-Containing Protein; Glutamate Synthetase; Glutamate Synthase Domain Protein; Zinc Finger CDGSH-Type; Cupin 2 Domain-Containing Protein; Glutamate Synthetas; Zinc Finger Cdgsh-Type Domain Protein; Conserved Region In Glutamate Synthase Family; Ferredoxin-Dependent Glutamate Synthase Peptide; Iron Sulfur-Containing Domain Cdgsh-Type

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSDTPKIAQTAPYPVDVIAGKSYFWCTCGQSSKQPFCDGSHKDTGFAPMKYEAEEDRKVFFCGCKATSKAPMCDGSHSKL

Sequences:

>Translated_80_residues
MSDTPKIAQTAPYPVDVIAGKSYFWCTCGQSSKQPFCDGSHKDTGFAPMKYEAEEDRKVFFCGCKATSKAPMCDGSHSKL
>Mature_79_residues
SDTPKIAQTAPYPVDVIAGKSYFWCTCGQSSKQPFCDGSHKDTGFAPMKYEAEEDRKVFFCGCKATSKAPMCDGSHSKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI211057411, Length=73, Percent_Identity=53.4246575342466, Blast_Score=93, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115534146, Length=82, Percent_Identity=39.0243902439024, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17556380, Length=69, Percent_Identity=43.4782608695652, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573970, Length=77, Percent_Identity=35.0649350649351, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8750; Mature: 8619

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPKIAQTAPYPVDVIAGKSYFWCTCGQSSKQPFCDGSHKDTGFAPMKYEAEEDRKVF
CCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE
FCGCKATSKAPMCDGSHSKL
EECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDTPKIAQTAPYPVDVIAGKSYFWCTCGQSSKQPFCDGSHKDTGFAPMKYEAEEDRKVF
CCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE
FCGCKATSKAPMCDGSHSKL
EECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA