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The map label for this gene is yfgC [C]

Identifier: 110678960

GI number: 110678960

Start: 1592204

End: 1592914

Strand: Direct

Name: yfgC [C]

Synonym: RD1_1656

Alternate gene names: 110678960

Gene position: 1592204-1592914 (Clockwise)

Preceding gene: 110678957

Following gene: 110678964

Centisome position: 38.52

GC content: 62.17

Gene sequence:

>711_bases
ATGCGCAAGATTGGTTTATTTGCCGTTATCGCGCTGGTGTGTGCCGGGTGCACCGTCTCGACCCAGCCCGGCCCGTCTGC
CCCACCGGCGCAGACGCCGGCCCGCACGGATCCTCTGCCCGCATCCGATACGATGCGCAACTTCAGGAACGTGGTGCGAA
CCGTTGAACCGGTTGCCGAGCGCGAATGCCGGGCCCGGACGTCACGGGTGAACTGTGATTTCAAAATTCTGGTAGATGAA
CGCCCGGATCAACCGCCCAATGCGTTTCAGACCATTGATCAGTCAGGCCGCCCGATTATCGCCTTTACGGTGCAGTTGAT
CGCCGATGCGCGCAATCAGGATGAGCTGGCTTTTGTGCTCGGCCATGAAGCCGCGCACCATATTTCGGGCCATATCGGAC
GCCAGCAACAAAACGCCGTGGCAGGTGCCGTGATCGCGGGCAGCCTTGCGGTCTTGCTGGGCGGGGATGCCACCGCTGTG
GAAGTTGCGCAGCAACGCGGCGCGCAGGTTGGCGCGCGCACTTATTCCAAGGATTTCGAACTGGAGGCGGATGCGCTTGG
CACGGTGATTGCATCTCGCGCGGGCTATGATCCGGTGCGGGGTGCTGAGTTTTTTACGCGCATCCCCGATCCGGGCAACA
AGTTTCTTGGCACCCATCCGCCCAATGCGCAGCGCATCGCCACCGTCAGACGGGTCGCTGCCGGTCTGTGA

Upstream 100 bases:

>100_bases
TTTGCAAGTCTCACAAGGCCGCGAGCGGGGACTGGTTGTCAGCGTGAATGATGCTAATATGTTTCCCAGCAGGGTCGTTG
TGAAACAGGGGTACGTTCTG

Downstream 100 bases:

>100_bases
TCACGCCGTCCCGCGCCTGAGCCGCCGCATGTACCAGCGGTAAATCAGCGGGGCGAGCATATGGTCATACGCGACACAGG
CCAGCCAATGCACGCCGGGC

Product: M48 family peptidase putative

Products: NA

Alternate protein names: M48 Family Peptidase; Peptidase M; Peptidase Protein; Zn-Dependent Protease With Chaperone Function; Lipoprotein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRKIGLFAVIALVCAGCTVSTQPGPSAPPAQTPARTDPLPASDTMRNFRNVVRTVEPVAERECRARTSRVNCDFKILVDE
RPDQPPNAFQTIDQSGRPIIAFTVQLIADARNQDELAFVLGHEAAHHISGHIGRQQQNAVAGAVIAGSLAVLLGGDATAV
EVAQQRGAQVGARTYSKDFELEADALGTVIASRAGYDPVRGAEFFTRIPDPGNKFLGTHPPNAQRIATVRRVAAGL

Sequences:

>Translated_236_residues
MRKIGLFAVIALVCAGCTVSTQPGPSAPPAQTPARTDPLPASDTMRNFRNVVRTVEPVAERECRARTSRVNCDFKILVDE
RPDQPPNAFQTIDQSGRPIIAFTVQLIADARNQDELAFVLGHEAAHHISGHIGRQQQNAVAGAVIAGSLAVLLGGDATAV
EVAQQRGAQVGARTYSKDFELEADALGTVIASRAGYDPVRGAEFFTRIPDPGNKFLGTHPPNAQRIATVRRVAAGL
>Mature_236_residues
MRKIGLFAVIALVCAGCTVSTQPGPSAPPAQTPARTDPLPASDTMRNFRNVVRTVEPVAERECRARTSRVNCDFKILVDE
RPDQPPNAFQTIDQSGRPIIAFTVQLIADARNQDELAFVLGHEAAHHISGHIGRQQQNAVAGAVIAGSLAVLLGGDATAV
EVAQQRGAQVGARTYSKDFELEADALGTVIASRAGYDPVRGAEFFTRIPDPGNKFLGTHPPNAQRIATVRRVAAGL

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25124; Mature: 25124

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00782 TFIIB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIGLFAVIALVCAGCTVSTQPGPSAPPAQTPARTDPLPASDTMRNFRNVVRTVEPVAE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RECRARTSRVNCDFKILVDERPDQPPNAFQTIDQSGRPIIAFTVQLIADARNQDELAFVL
HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEHHHHHHHCCCCCCCEEEEE
GHEAAHHISGHIGRQQQNAVAGAVIAGSLAVLLGGDATAVEVAQQRGAQVGARTYSKDFE
CCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCC
LEADALGTVIASRAGYDPVRGAEFFTRIPDPGNKFLGTHPPNAQRIATVRRVAAGL
CCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKIGLFAVIALVCAGCTVSTQPGPSAPPAQTPARTDPLPASDTMRNFRNVVRTVEPVAE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RECRARTSRVNCDFKILVDERPDQPPNAFQTIDQSGRPIIAFTVQLIADARNQDELAFVL
HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEHHHHHHHCCCCCCCEEEEE
GHEAAHHISGHIGRQQQNAVAGAVIAGSLAVLLGGDATAVEVAQQRGAQVGARTYSKDFE
CCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCC
LEADALGTVIASRAGYDPVRGAEFFTRIPDPGNKFLGTHPPNAQRIATVRRVAAGL
CCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA