Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yhaI [C]

Identifier: 110678916

GI number: 110678916

Start: 1554727

End: 1555233

Strand: Reverse

Name: yhaI [C]

Synonym: RD1_1610

Alternate gene names: 110678916

Gene position: 1555233-1554727 (Counterclockwise)

Preceding gene: 110678917

Following gene: 110678915

Centisome position: 37.63

GC content: 53.25

Gene sequence:

>507_bases
ATGACCTTCACCCAATCCATCAAAACCTGCTTTCGAAAATACTTCACGTTCTCCGGCCGTGCATCGCGATCAGAATACTG
GTGGTTTTTCCTGTTCACTATCTTGGGCGGTTTGTTTTTCGGTTTTATTGAGGGGTTCATCAACGGAGCATCGGGCACCC
CCGACGGCCCGACCCTGCTGTCCGGAGCCTTCAACCTGGCTACTTTTGTTCCAACTCTCGCCGTTGGCTGGCGTCGCATG
CACGACAGCGGGCGGTCGGGTGTCTATCTGTTTTATCCGTTGATCGCGATTGTTGGGCTATCCATTTTCATCGGTCTTTT
TGGAGGCACTGAGCTTCTCACCAGCTCCGACCCTGCATCTTTATTTGAGGGTGCCTTCGGGATCATCGTGATCATTTCGC
TGATCGTCGTAGCACTTTCGCCATTCATCGTAGTCTTCTGGCTCACTCGCCCGTCTCAACCCGGCCCCAACACCTACGGT
CCCAACCCAAATGAGGTATCCCAATGA

Upstream 100 bases:

>100_bases
GGGCAGTGCCCGAACCGAGGCTAAGGAAGCGAAGCGCCCGCCCCGTGAGGGCGGTTCGGGCGCTGCCCGGCGGTACCCGC
CAGGCGGAAGGGTGCGCTCA

Downstream 100 bases:

>100_bases
CCGACCATCCCGCCAACGACCAGTTCCATGCGTCCTCCTTCATGCAGGGGCACAACGCGGAATATCTCGAACAGATGTAT
GCGCGCTATGCCAATGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTFTQSIKTCFRKYFTFSGRASRSEYWWFFLFTILGGLFFGFIEGFINGASGTPDGPTLLSGAFNLATFVPTLAVGWRRM
HDSGRSGVYLFYPLIAIVGLSIFIGLFGGTELLTSSDPASLFEGAFGIIVIISLIVVALSPFIVVFWLTRPSQPGPNTYG
PNPNEVSQ

Sequences:

>Translated_168_residues
MTFTQSIKTCFRKYFTFSGRASRSEYWWFFLFTILGGLFFGFIEGFINGASGTPDGPTLLSGAFNLATFVPTLAVGWRRM
HDSGRSGVYLFYPLIAIVGLSIFIGLFGGTELLTSSDPASLFEGAFGIIVIISLIVVALSPFIVVFWLTRPSQPGPNTYG
PNPNEVSQ
>Mature_167_residues
TFTQSIKTCFRKYFTFSGRASRSEYWWFFLFTILGGLFFGFIEGFINGASGTPDGPTLLSGAFNLATFVPTLAVGWRRMH
DSGRSGVYLFYPLIAIVGLSIFIGLFGGTELLTSSDPASLFEGAFGIIVIISLIVVALSPFIVVFWLTRPSQPGPNTYGP
NPNEVSQ

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18376; Mature: 18245

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTQSIKTCFRKYFTFSGRASRSEYWWFFLFTILGGLFFGFIEGFINGASGTPDGPTLL
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
SGAFNLATFVPTLAVGWRRMHDSGRSGVYLFYPLIAIVGLSIFIGLFGGTELLTSSDPAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH
LFEGAFGIIVIISLIVVALSPFIVVFWLTRPSQPGPNTYGPNPNEVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFTQSIKTCFRKYFTFSGRASRSEYWWFFLFTILGGLFFGFIEGFINGASGTPDGPTLL
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
SGAFNLATFVPTLAVGWRRMHDSGRSGVYLFYPLIAIVGLSIFIGLFGGTELLTSSDPAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH
LFEGAFGIIVIISLIVVALSPFIVVFWLTRPSQPGPNTYGPNPNEVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA