| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678912
Identifier: 110678912
GI number: 110678912
Start: 1549037
End: 1549306
Strand: Reverse
Name: 110678912
Synonym: RD1_1606
Alternate gene names: NA
Gene position: 1549306-1549037 (Counterclockwise)
Preceding gene: 110678913
Following gene: 110678911
Centisome position: 37.49
GC content: 61.48
Gene sequence:
>270_bases GTGACCACGAAACCATCCCCAGAACCACCGGCATCCCCGCTTCTGAAACCGATCTTGCGCTTCATCGCCTTCGCGATTGA AGCGCCCGCAACGGCAGCGGTCCGGATCGCCTGCGCCATGAGCGTGATCGCCCTGCTGATCCATACCAAGGCCAGCCTGC TCGGCGCATCCGCCACCGGCACAGGGTTTGCCGTGCTTTATGCCACATCCGCATGGGGCATCGCGCTTTATCTGCGCGCA AAAGAACGCGGTGGAAAAGATGACACCTGA
Upstream 100 bases:
>100_bases GCCTATGCCTTCGGATTGACGGGCATCCGCAGCCTCGCGTGGACGGTCGGGTTGCTGTCGACCGCACTGCTCTATTTCCT GTCGCTGTGAAAGGGATCCC
Downstream 100 bases:
>100_bases ACTGACGGTCCTTGCGCTGGCAGCGCTGTTGCAGGTCGCCCAGATGTGCGCCTATTCCGTCGCCGCCAATATGCAGGTTG ATGCCAAAACAGCCTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTTKPSPEPPASPLLKPILRFIAFAIEAPATAAVRIACAMSVIALLIHTKASLLGASATGTGFAVLYATSAWGIALYLRA KERGGKDDT
Sequences:
>Translated_89_residues MTTKPSPEPPASPLLKPILRFIAFAIEAPATAAVRIACAMSVIALLIHTKASLLGASATGTGFAVLYATSAWGIALYLRA KERGGKDDT >Mature_88_residues TTKPSPEPPASPLLKPILRFIAFAIEAPATAAVRIACAMSVIALLIHTKASLLGASATGTGFAVLYATSAWGIALYLRAK ERGGKDDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9212; Mature: 9081
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKPSPEPPASPLLKPILRFIAFAIEAPATAAVRIACAMSVIALLIHTKASLLGASATG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TGFAVLYATSAWGIALYLRAKERGGKDDT CCEEEEEECCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure TTKPSPEPPASPLLKPILRFIAFAIEAPATAAVRIACAMSVIALLIHTKASLLGASATG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TGFAVLYATSAWGIALYLRAKERGGKDDT CCEEEEEECCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA