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The map label for this gene is 110678895

Identifier: 110678895

GI number: 110678895

Start: 1534871

End: 1536253

Strand: Reverse

Name: 110678895

Synonym: RD1_1589

Alternate gene names: NA

Gene position: 1536253-1534871 (Counterclockwise)

Preceding gene: 110678896

Following gene: 110678894

Centisome position: 37.17

GC content: 56.33

Gene sequence:

>1383_bases
GTGCCGTTTTACAGCAGTTTACGCAAAAGCTATCCCGCTGGCTCTGCTGAGGAAACGCTGCGCAAACGCACGCTTGCCGG
TATTCGACGACTGCGCGCCGCCTTGGCTGACCATTTTCCCAGCGATACAGATCGCATGGGAACGGTGCGCATCGGCACAT
GGAACATCCGCGAATTCGGTAATGCAAAATTCGGCGGGCGCGACAGCTATGAACCGCTGTATTACATGGCCGAAATCATC
TCGAACTTCGACATCGCCGCAATTCAGGAAGTGCGCGATGACATGCGCGAGTTCACCCAACTGCTGGAAATTCTCGGACC
CGATTGGGATTACATCGCCACCGATGTGACAGATGGTGCCGCCGGAAACGGTGAGCGGATGGTGTTCATGTTCAACCGCA
ATCGCGCACGGTTTCGCAATATCGCGGGCGAGTTGACACTGCCCGAGGGCAAGAAGGTGCTCGCCAGCTTTGGTGAACGC
ATCAAGCTGGAGAACGGCATCGCTCTGCAATTGCCGCCCGGGGCGGACCTGTCCGGCGTCTACCGGGCGCGATCCTTGCG
AAACAACAGCAAGATACGTCTGGATCAGGACGTGGAAATCCCGCTGCCCGACGGCACGATGTTGCAACTGCCCGACGGCA
GCGGGCTGGCCGTGACAAAAGGCACCGAGGTTACCCGCCCGCCCAACACACGCGGACAGGTGAATGTGGATTTGCCAGCA
GGCGTTGTGGCGGGAGAGGCCTTTCGCCTCAGGTTTCCCGGGGATGCGCTCGACCAGAGCTTCAAGCAGTTCGCGCGCAC
CCCTTTTCTGGTCAGTTTTCAGGCAGGGTGGCTAAAAATTGACCTCGCCACGGTGCATATCTATTTCGGCTCGAATGAAG
ACGACAGGTTGCTGGAACAGAGACGCCGGGAAATCGCCAGACTGACCGAAGCCATCGGCAACCGCGCTTCAAAGGAGATG
AAAAAGAACCCTGACAATGCGATGGTGACTGCCGTTCTGGGTGATTTCAACATCATCAGCCCGGAACATGAGACGATGCA
GGCACTGGAAGCCAACGGTTTCGAAGTGCCCGACAAGATCAAGCAAATTCCCGGATCAAACGTTGATAAATCAAAGGCAT
ACGATCAAATCGCATTCTGGGAACCCAAGCGCAGCCGCGGCTATGCCCATGTGAAAGTACATGGCGCGAACGTCTTTGAC
TTTTTCGAACATGTCTATCGGCTGGATGAACGCGACACCTATCAGCCACACCGCTCAGAGCGGTCGTATAAAAACTGGCG
CACCTATAAAATGAGCGACCACCTGCCCATGTGGGTTGAGCTTGCAAGCGACTTTTCGGACGCTTTTCTTGATGTGTGCG
ACGCGGCAGAGCCACCCGAATAA

Upstream 100 bases:

>100_bases
CCTGATTAAAACGGCTGCTGCGCAGGAAACAATGGACCTGTGACCAGATTTCTCTAGGCTGATGGATATTCAATCGATTG
GTTTTTGAGAGGCCCGCACC

Downstream 100 bases:

>100_bases
TACACGGTTATGGCATTTATCCCGGTGCGGGAGCCTGAAACTTGTCAAAACCAAACCTTTCGTAGGTATTGTTCACACTG
CCGGGGTGGAAAACACATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MPFYSSLRKSYPAGSAEETLRKRTLAGIRRLRAALADHFPSDTDRMGTVRIGTWNIREFGNAKFGGRDSYEPLYYMAEII
SNFDIAAIQEVRDDMREFTQLLEILGPDWDYIATDVTDGAAGNGERMVFMFNRNRARFRNIAGELTLPEGKKVLASFGER
IKLENGIALQLPPGADLSGVYRARSLRNNSKIRLDQDVEIPLPDGTMLQLPDGSGLAVTKGTEVTRPPNTRGQVNVDLPA
GVVAGEAFRLRFPGDALDQSFKQFARTPFLVSFQAGWLKIDLATVHIYFGSNEDDRLLEQRRREIARLTEAIGNRASKEM
KKNPDNAMVTAVLGDFNIISPEHETMQALEANGFEVPDKIKQIPGSNVDKSKAYDQIAFWEPKRSRGYAHVKVHGANVFD
FFEHVYRLDERDTYQPHRSERSYKNWRTYKMSDHLPMWVELASDFSDAFLDVCDAAEPPE

Sequences:

>Translated_460_residues
MPFYSSLRKSYPAGSAEETLRKRTLAGIRRLRAALADHFPSDTDRMGTVRIGTWNIREFGNAKFGGRDSYEPLYYMAEII
SNFDIAAIQEVRDDMREFTQLLEILGPDWDYIATDVTDGAAGNGERMVFMFNRNRARFRNIAGELTLPEGKKVLASFGER
IKLENGIALQLPPGADLSGVYRARSLRNNSKIRLDQDVEIPLPDGTMLQLPDGSGLAVTKGTEVTRPPNTRGQVNVDLPA
GVVAGEAFRLRFPGDALDQSFKQFARTPFLVSFQAGWLKIDLATVHIYFGSNEDDRLLEQRRREIARLTEAIGNRASKEM
KKNPDNAMVTAVLGDFNIISPEHETMQALEANGFEVPDKIKQIPGSNVDKSKAYDQIAFWEPKRSRGYAHVKVHGANVFD
FFEHVYRLDERDTYQPHRSERSYKNWRTYKMSDHLPMWVELASDFSDAFLDVCDAAEPPE
>Mature_459_residues
PFYSSLRKSYPAGSAEETLRKRTLAGIRRLRAALADHFPSDTDRMGTVRIGTWNIREFGNAKFGGRDSYEPLYYMAEIIS
NFDIAAIQEVRDDMREFTQLLEILGPDWDYIATDVTDGAAGNGERMVFMFNRNRARFRNIAGELTLPEGKKVLASFGERI
KLENGIALQLPPGADLSGVYRARSLRNNSKIRLDQDVEIPLPDGTMLQLPDGSGLAVTKGTEVTRPPNTRGQVNVDLPAG
VVAGEAFRLRFPGDALDQSFKQFARTPFLVSFQAGWLKIDLATVHIYFGSNEDDRLLEQRRREIARLTEAIGNRASKEMK
KNPDNAMVTAVLGDFNIISPEHETMQALEANGFEVPDKIKQIPGSNVDKSKAYDQIAFWEPKRSRGYAHVKVHGANVFDF
FEHVYRLDERDTYQPHRSERSYKNWRTYKMSDHLPMWVELASDFSDAFLDVCDAAEPPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52027; Mature: 51896

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFYSSLRKSYPAGSAEETLRKRTLAGIRRLRAALADHFPSDTDRMGTVRIGTWNIREFG
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCC
NAKFGGRDSYEPLYYMAEIISNFDIAAIQEVRDDMREFTQLLEILGPDWDYIATDVTDGA
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
AGNGERMVFMFNRNRARFRNIAGELTLPEGKKVLASFGERIKLENGIALQLPPGADLSGV
CCCCCEEEEEECCCHHHHHHCCCCEECCCHHHHHHHHCCCEEECCCEEEEECCCCCHHHH
YRARSLRNNSKIRLDQDVEIPLPDGTMLQLPDGSGLAVTKGTEVTRPPNTRGQVNVDLPA
HHHHHHCCCCCEEECCCCEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCEEEECCCC
GVVAGEAFRLRFPGDALDQSFKQFARTPFLVSFQAGWLKIDLATVHIYFGSNEDDRLLEQ
CEECCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEEEEECCCCHHHHHHH
RRREIARLTEAIGNRASKEMKKNPDNAMVTAVLGDFNIISPEHETMQALEANGFEVPDKI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCHHHHHHHHCCCCCCCHHH
KQIPGSNVDKSKAYDQIAFWEPKRSRGYAHVKVHGANVFDFFEHVYRLDERDTYQPHRSE
HHCCCCCCCHHHHHCCCEEECCHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
RSYKNWRTYKMSDHLPMWVELASDFSDAFLDVCDAAEPPE
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PFYSSLRKSYPAGSAEETLRKRTLAGIRRLRAALADHFPSDTDRMGTVRIGTWNIREFG
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCC
NAKFGGRDSYEPLYYMAEIISNFDIAAIQEVRDDMREFTQLLEILGPDWDYIATDVTDGA
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
AGNGERMVFMFNRNRARFRNIAGELTLPEGKKVLASFGERIKLENGIALQLPPGADLSGV
CCCCCEEEEEECCCHHHHHHCCCCEECCCHHHHHHHHCCCEEECCCEEEEECCCCCHHHH
YRARSLRNNSKIRLDQDVEIPLPDGTMLQLPDGSGLAVTKGTEVTRPPNTRGQVNVDLPA
HHHHHHCCCCCEEECCCCEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCEEEECCCC
GVVAGEAFRLRFPGDALDQSFKQFARTPFLVSFQAGWLKIDLATVHIYFGSNEDDRLLEQ
CEECCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEEEEECCCCHHHHHHH
RRREIARLTEAIGNRASKEMKKNPDNAMVTAVLGDFNIISPEHETMQALEANGFEVPDKI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCHHHHHHHHCCCCCCCHHH
KQIPGSNVDKSKAYDQIAFWEPKRSRGYAHVKVHGANVFDFFEHVYRLDERDTYQPHRSE
HHCCCCCCCHHHHHCCCEEECCHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
RSYKNWRTYKMSDHLPMWVELASDFSDAFLDVCDAAEPPE
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA