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The map label for this gene is cbiX

Identifier: 110678881

GI number: 110678881

Start: 1496741

End: 1497493

Strand: Direct

Name: cbiX

Synonym: RD1_1574

Alternate gene names: NA

Gene position: 1496741-1497493 (Clockwise)

Preceding gene: 110678880

Following gene: 110678882

Centisome position: 36.21

GC content: 63.75

Gene sequence:

>753_bases
ATGTTTTCAATAAGATCACCTTTTCTGACGGCACCAGTCATTGATCGGCCCATCCTTGTGGTCACACATGGTTCACCCTC
TGAACCTGCACCACAGGAAGCGGCCGTGCAGGCGTTGGCGGCGCGGCTGAACCAGCTTCTGCCCGACACTACGGTGCGCG
GCGCGACCCTTGCGTCCGAGGGCGCGCTGGATCGGGCTGTGCGGGGCCTGGAGCGGCCGATCGTCTGCCCCTGGTTCATG
TCCGATGGTTGGTTTGTCAAAACCCATCTGCCCAAACGGCTGAAAGCGGCGGGTCTGTCCGATTGGGAGGCGACAGCGCC
GATGGGGCTGATGCCGGGGGTGGCGCGGCTGATGTGTGATCGCATACGCCTGCGTATTGCGACGCTGGATTGGCAGATGG
CGCAAACCACTGTCATTCTCGCCGCGCACGGCTCACCCTCCAGCAGCAAGCCGCGCGAGGCGACCGAAGCCGCAGCAAGG
GCGCTGGCGGCACAGGGCGCATTCAAGGCGGTTCGACCCTGTTACGTGGACGAGCCCCCCGCGATCCGCGATGTGGTGTC
TGCGGTTCAGGGTCACGCCATTGTGGTGCCGTTCTTTGCCGTGCGTGCGGGTCATGTCACGGGTGATCTGCCCGAAGAAC
TTGAGGCTGCGCGGTTCAACGGGCCGGTTCTGGACCCTGTTGGAACATGGCCAGAGACGCCTGCGCTGGCGCTGGCCGCG
ATTACCGACCTGTTCAAACCGGAGTGTGTATGA

Upstream 100 bases:

>100_bases
GTCAGCCTGTGGGAAGACGACGGGGCGATCCTGATCTACGACGCGCAGACGCTGGAAGAAGTCAAACGGCTACCCATGAG
CAAACCATCAGGGAAATACA

Downstream 100 bases:

>100_bases
GCGATGACCGCCCCTGGCCGGTGTGGAAACTGGCGCTGTTGATGTATCCCTTTGCGTCTGGTGCGGTGGCGATCAACCTC
TTCATGCTCAGCCTGATGGC

Product: CbiX protein, putative

Products: NA

Alternate protein names: Cobalamin; Cobalamin Biosynthesis Protein CbiX; CbiX Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MFSIRSPFLTAPVIDRPILVVTHGSPSEPAPQEAAVQALAARLNQLLPDTTVRGATLASEGALDRAVRGLERPIVCPWFM
SDGWFVKTHLPKRLKAAGLSDWEATAPMGLMPGVARLMCDRIRLRIATLDWQMAQTTVILAAHGSPSSSKPREATEAAAR
ALAAQGAFKAVRPCYVDEPPAIRDVVSAVQGHAIVVPFFAVRAGHVTGDLPEELEAARFNGPVLDPVGTWPETPALALAA
ITDLFKPECV

Sequences:

>Translated_250_residues
MFSIRSPFLTAPVIDRPILVVTHGSPSEPAPQEAAVQALAARLNQLLPDTTVRGATLASEGALDRAVRGLERPIVCPWFM
SDGWFVKTHLPKRLKAAGLSDWEATAPMGLMPGVARLMCDRIRLRIATLDWQMAQTTVILAAHGSPSSSKPREATEAAAR
ALAAQGAFKAVRPCYVDEPPAIRDVVSAVQGHAIVVPFFAVRAGHVTGDLPEELEAARFNGPVLDPVGTWPETPALALAA
ITDLFKPECV
>Mature_250_residues
MFSIRSPFLTAPVIDRPILVVTHGSPSEPAPQEAAVQALAARLNQLLPDTTVRGATLASEGALDRAVRGLERPIVCPWFM
SDGWFVKTHLPKRLKAAGLSDWEATAPMGLMPGVARLMCDRIRLRIATLDWQMAQTTVILAAHGSPSSSKPREATEAAAR
ALAAQGAFKAVRPCYVDEPPAIRDVVSAVQGHAIVVPFFAVRAGHVTGDLPEELEAARFNGPVLDPVGTWPETPALALAA
ITDLFKPECV

Specific function: Unknown

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26707; Mature: 26707

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSIRSPFLTAPVIDRPILVVTHGSPSEPAPQEAAVQALAARLNQLLPDTTVRGATLASE
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GALDRAVRGLERPIVCPWFMSDGWFVKTHLPKRLKAAGLSDWEATAPMGLMPGVARLMCD
HHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
RIRLRIATLDWQMAQTTVILAAHGSPSSSKPREATEAAARALAAQGAFKAVRPCYVDEPP
HHHHEEEECCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AIRDVVSAVQGHAIVVPFFAVRAGHVTGDLPEELEAARFNGPVLDPVGTWPETPALALAA
HHHHHHHHHCCCEEEEEHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ITDLFKPECV
HHHHHCCCCC
>Mature Secondary Structure
MFSIRSPFLTAPVIDRPILVVTHGSPSEPAPQEAAVQALAARLNQLLPDTTVRGATLASE
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GALDRAVRGLERPIVCPWFMSDGWFVKTHLPKRLKAAGLSDWEATAPMGLMPGVARLMCD
HHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
RIRLRIATLDWQMAQTTVILAAHGSPSSSKPREATEAAARALAAQGAFKAVRPCYVDEPP
HHHHEEEECCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AIRDVVSAVQGHAIVVPFFAVRAGHVTGDLPEELEAARFNGPVLDPVGTWPETPALALAA
HHHHHHHHHCCCEEEEEHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ITDLFKPECV
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA