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The map label for this gene is nirN [H]

Identifier: 110678880

GI number: 110678880

Start: 1495237

End: 1496784

Strand: Direct

Name: nirN [H]

Synonym: RD1_1573

Alternate gene names: 110678880

Gene position: 1495237-1496784 (Clockwise)

Preceding gene: 110678879

Following gene: 110678881

Centisome position: 36.18

GC content: 60.14

Gene sequence:

>1548_bases
ATGATCCGGCGCATAATTTCACTTAGTCTGCTGGCGCTCACACCGCTGAGCGCTCAAGGCGAACCGGCAGTTCTCTATGC
CACCCATTGCGCGGTCTGCCACGGCGATGACCGTCTGGGCAGCCTTGGCCCTGCCTTGATCCCCGAAAGCCTGCGCCGTC
TGAAGGGCGACAAGCTGGAAGCGGTGATCGCACAGGGGCGCATCAGCACGCAGATGCCCGGCTTTGACGCACAGATCAGT
GCCGAGGATATCACCGAACTGGCCGCTTATCTGCACACGCCCCTGCCGGAAATACCGGTGTGGAACGCGGAGCGTATTGC
CGAAACGCTTGAGGTGAACCCCGATTACGTCGCACCCGATGCGCCGCAACATGATGCCGATCCGCTCAATATCTTCGTGG
TGGTGGAAACCGGTGATCACCACATCAGCGTGCTGGATGGCGACACATTTGACGTGCTCGCCCGGCTACCCACACCGCTG
GCCGTGCATGGCGGGCCGAAATTCACCCCCGACGGGCGGTTCACCTTTGTGATGTCGCGCGACGGCTGGGTGCAAAAGAT
CGACCTGTGGTCCATGCAGGAGGTCGCGCGTCTGCGCGCGGGCGTCAACAGCCGCAACATCGCCATGTCCAAGGACGGCA
AATACCTCGCCGTGGCCAATTACCTGCCCCATAGCCTGACCATTCTCTCCACGGCGGATATGTCGGTAGAGCGCATCTTT
GATGTGGTGGGCAAAGACGGTGAATCCTCGCGGGTCTCTGCCGTCTATCAGGCCCCGCAGCGCGACAGTTTCATTCTTGC
TCTGAAAGACATCCCCGAGATCTGGGAGGTTGCGACCGATCCCAAGGCGGACCCCGTGTACGAAGGTTTCGTGCATAGTC
GCGAAAAGGGCATGGTCGAGGCGATCGCTTCGTCCGAGGGGCTTTTTGCGCGCCGCCGCATCGAAGTGACCGAGCCGCTG
GATGATTTCTTTTTCACGCCGGATTACCGGTTTCTGATCGGGGCCGCGCGGGAAAGCGACCGGGGCGTTGTGGTCAACCT
GAACGTGGGCCGCGAGACGCATGAATTGCCGCTCTCGGGTCTGCCGCATCTGGGGTCGGGCATCTCTTGGGAGTATCAGG
GGCGGCGCGTCATGGCGACACCGCACCTGCGCGAGGCAAAACTGTCGGTTATCGACATTCAGAACTGGGAAGTCCTGACG
CAGATCGACACCGACGGGCCGGGGTTTTTCATGCGCAGCCATGAAAATTCGCCCTACGTCTGGGCTGATGTGTTTTTCGG
CCCCAACCGTGACGTGATGCATGTGATCGACAAGCAGACGCTGGAGATCGTCAAGACCCTGCGCCCCGTGCCCGGCAAGA
CGCTGGCGCATGTGGAGTTTGATCGTGAAGGTCGCCACGCGCTTGTCAGCCTGTGGGAAGACGACGGGGCGATCCTGATC
TACGACGCGCAGACGCTGGAAGAAGTCAAACGGCTACCCATGAGCAAACCATCAGGGAAATACAATGTTTTCAATAAGAT
CACCTTTTCTGACGGCACCAGTCATTGA

Upstream 100 bases:

>100_bases
TGGGAGGAAGACCCCGCCTGCTATCTGTCAGACGCCGAGATCGGGTTGGACGGGGCGAAGGCCCCGCGCATTGAACTTCG
CAAATTCACCGGGAGGCGAC

Downstream 100 bases:

>100_bases
TCGGCCCATCCTTGTGGTCACACATGGTTCACCCTCTGAACCTGCACCACAGGAAGCGGCCGTGCAGGCGTTGGCGGCGC
GGCTGAACCAGCTTCTGCCC

Product: nitrite reductase protein N

Products: NA

Alternate protein names: Cytochrome cd1; Cytochrome oxidase; Hydroxylamine reductase [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MIRRIISLSLLALTPLSAQGEPAVLYATHCAVCHGDDRLGSLGPALIPESLRRLKGDKLEAVIAQGRISTQMPGFDAQIS
AEDITELAAYLHTPLPEIPVWNAERIAETLEVNPDYVAPDAPQHDADPLNIFVVVETGDHHISVLDGDTFDVLARLPTPL
AVHGGPKFTPDGRFTFVMSRDGWVQKIDLWSMQEVARLRAGVNSRNIAMSKDGKYLAVANYLPHSLTILSTADMSVERIF
DVVGKDGESSRVSAVYQAPQRDSFILALKDIPEIWEVATDPKADPVYEGFVHSREKGMVEAIASSEGLFARRRIEVTEPL
DDFFFTPDYRFLIGAARESDRGVVVNLNVGRETHELPLSGLPHLGSGISWEYQGRRVMATPHLREAKLSVIDIQNWEVLT
QIDTDGPGFFMRSHENSPYVWADVFFGPNRDVMHVIDKQTLEIVKTLRPVPGKTLAHVEFDREGRHALVSLWEDDGAILI
YDAQTLEEVKRLPMSKPSGKYNVFNKITFSDGTSH

Sequences:

>Translated_515_residues
MIRRIISLSLLALTPLSAQGEPAVLYATHCAVCHGDDRLGSLGPALIPESLRRLKGDKLEAVIAQGRISTQMPGFDAQIS
AEDITELAAYLHTPLPEIPVWNAERIAETLEVNPDYVAPDAPQHDADPLNIFVVVETGDHHISVLDGDTFDVLARLPTPL
AVHGGPKFTPDGRFTFVMSRDGWVQKIDLWSMQEVARLRAGVNSRNIAMSKDGKYLAVANYLPHSLTILSTADMSVERIF
DVVGKDGESSRVSAVYQAPQRDSFILALKDIPEIWEVATDPKADPVYEGFVHSREKGMVEAIASSEGLFARRRIEVTEPL
DDFFFTPDYRFLIGAARESDRGVVVNLNVGRETHELPLSGLPHLGSGISWEYQGRRVMATPHLREAKLSVIDIQNWEVLT
QIDTDGPGFFMRSHENSPYVWADVFFGPNRDVMHVIDKQTLEIVKTLRPVPGKTLAHVEFDREGRHALVSLWEDDGAILI
YDAQTLEEVKRLPMSKPSGKYNVFNKITFSDGTSH
>Mature_515_residues
MIRRIISLSLLALTPLSAQGEPAVLYATHCAVCHGDDRLGSLGPALIPESLRRLKGDKLEAVIAQGRISTQMPGFDAQIS
AEDITELAAYLHTPLPEIPVWNAERIAETLEVNPDYVAPDAPQHDADPLNIFVVVETGDHHISVLDGDTFDVLARLPTPL
AVHGGPKFTPDGRFTFVMSRDGWVQKIDLWSMQEVARLRAGVNSRNIAMSKDGKYLAVANYLPHSLTILSTADMSVERIF
DVVGKDGESSRVSAVYQAPQRDSFILALKDIPEIWEVATDPKADPVYEGFVHSREKGMVEAIASSEGLFARRRIEVTEPL
DDFFFTPDYRFLIGAARESDRGVVVNLNVGRETHELPLSGLPHLGSGISWEYQGRRVMATPHLREAKLSVIDIQNWEVLT
QIDTDGPGFFMRSHENSPYVWADVFFGPNRDVMHVIDKQTLEIVKTLRPVPGKTLAHVEFDREGRHALVSLWEDDGAILI
YDAQTLEEVKRLPMSKPSGKYNVFNKITFSDGTSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR011048
- InterPro:   IPR003143 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.7.2.1; =1.7.99.1 [H]

Molecular weight: Translated: 57233; Mature: 57233

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRIISLSLLALTPLSAQGEPAVLYATHCAVCHGDDRLGSLGPALIPESLRRLKGDKLE
CCHHHHEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEE
AVIAQGRISTQMPGFDAQISAEDITELAAYLHTPLPEIPVWNAERIAETLEVNPDYVAPD
EHEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCC
APQHDADPLNIFVVVETGDHHISVLDGDTFDVLARLPTPLAVHGGPKFTPDGRFTFVMSR
CCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEC
DGWVQKIDLWSMQEVARLRAGVNSRNIAMSKDGKYLAVANYLPHSLTILSTADMSVERIF
CCCEEEECCCCHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCHHHHH
DVVGKDGESSRVSAVYQAPQRDSFILALKDIPEIWEVATDPKADPVYEGFVHSREKGMVE
HHHCCCCCCCCEEHEECCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHCCHHH
AIASSEGLFARRRIEVTEPLDDFFFTPDYRFLIGAARESDRGVVVNLNVGRETHELPLSG
HHHCCCCCEEEEEEEECCCHHHHEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
LPHLGSGISWEYQGRRVMATPHLREAKLSVIDIQNWEVLTQIDTDGPGFFMRSHENSPYV
CCCCCCCCCEEECCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCEEEECCCCCCEE
WADVFFGPNRDVMHVIDKQTLEIVKTLRPVPGKTLAHVEFDREGRHALVSLWEDDGAILI
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEE
YDAQTLEEVKRLPMSKPSGKYNVFNKITFSDGTSH
EEHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MIRRIISLSLLALTPLSAQGEPAVLYATHCAVCHGDDRLGSLGPALIPESLRRLKGDKLE
CCHHHHEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEE
AVIAQGRISTQMPGFDAQISAEDITELAAYLHTPLPEIPVWNAERIAETLEVNPDYVAPD
EHEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCC
APQHDADPLNIFVVVETGDHHISVLDGDTFDVLARLPTPLAVHGGPKFTPDGRFTFVMSR
CCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEC
DGWVQKIDLWSMQEVARLRAGVNSRNIAMSKDGKYLAVANYLPHSLTILSTADMSVERIF
CCCEEEECCCCHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCHHHHH
DVVGKDGESSRVSAVYQAPQRDSFILALKDIPEIWEVATDPKADPVYEGFVHSREKGMVE
HHHCCCCCCCCEEHEECCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHCCHHH
AIASSEGLFARRRIEVTEPLDDFFFTPDYRFLIGAARESDRGVVVNLNVGRETHELPLSG
HHHCCCCCEEEEEEEECCCHHHHEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
LPHLGSGISWEYQGRRVMATPHLREAKLSVIDIQNWEVLTQIDTDGPGFFMRSHENSPYV
CCCCCCCCCEEECCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCEEEECCCCCCEE
WADVFFGPNRDVMHVIDKQTLEIVKTLRPVPGKTLAHVEFDREGRHALVSLWEDDGAILI
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEE
YDAQTLEEVKRLPMSKPSGKYNVFNKITFSDGTSH
EEHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2506077; 10984043; 2155133; 2152881; 9331415; 9760233; 10329702; 11226222; 11563915 [H]