| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is nosY
Identifier: 110678858
GI number: 110678858
Start: 1475469
End: 1476290
Strand: Direct
Name: nosY
Synonym: RD1_1550
Alternate gene names: NA
Gene position: 1475469-1476290 (Clockwise)
Preceding gene: 110678857
Following gene: 110678859
Centisome position: 35.7
GC content: 65.69
Gene sequence:
>822_bases ATGAGCGCTCTCTTCGCCATCGCCGCTACGGAATTCCGCATCCTGCGCCGCAATCGCTGGCTGGTCATTGCCACGGCACT GCTGTCGGTGTTTGCGCTGGCGCTGACCGTATCCGGGGCGACCACGTCCGGGGCATTGGGTGTTGATTTGCTGACCGTCT CCGTGGCCTCGATGACCACTCTGGCGGTTTATCTGGTGCCGCTGGTCGCTTTGTTGATGTCGTTCGAGGCCATCGCGGGG GATGCCGAACGCGGATCGCTGGCTTTGGTGCTGACCTATCCGGTGTCGCGCGGCGTGTTGCTGGCGGGCAAGTTCCTTGC GCATCTTTTGGGCCTCGCCATCGCGGTCGGCATTGGCTTTGGCCTTGCCGGGGCGCTGGCCTTTGCGCTGGGGGGTGCGG GTGTGTCCAGTGGATTGGCGCTGCTGCGTCTGATGCTGGGGGCGGTCCTGTTGGGGGCGGCCTTCATCGCGCTTGGCTAT GTCGTATCGGGGTTCAGCCGGTCTGTTGCCGCCGCCGCCGGGGGCGCGGGGTTCATCTGGCTGGTCCTTGTGGTGCTTTA TGATCTGGTGCTGCTCGCGCTTGTGGTCTGGGATGATGGCGGGCTGTTCAGCCGTCAGGTGTTTCCGTGGCTGCTGGCGG CAAACCCGGCGGACGCCTTGCGCCTGTTCAGTGTCACGGCCTCTGCCGATCAGGCGCTGGTGACAGGCATGGGCGCTGCG GTTGCGGCCCTGCCACAGGGCGCGGCACTGGTGTCCTTGTTGCTATGGCCGCTGCTGGGTCTGGCGCTGGCGCGCCTCGT GTTTGGACGGAGGGTTCCATGA
Upstream 100 bases:
>100_bases CCGATGTCACGGCCATGGGCGCGCAGGTCGCGGATGTTGAGATTATCCCGCCCTCGCTTGAGGACCTCTACCGATACTAT TCAAAACCTGCGGAGGCTTC
Downstream 100 bases:
>100_bases AGAAACTGTTGCTTTTGTCTGCGCTGCTCCTGATTGCCTGCAAGGAAGAGCTGGCCGAGGCGCCGGATCCGATGCCGCTG ACCGCCGAGAATGTGGCGCA
Product: nitrous oxide maturation protein NosY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSALFAIAATEFRILRRNRWLVIATALLSVFALALTVSGATTSGALGVDLLTVSVASMTTLAVYLVPLVALLMSFEAIAG DAERGSLALVLTYPVSRGVLLAGKFLAHLLGLAIAVGIGFGLAGALAFALGGAGVSSGLALLRLMLGAVLLGAAFIALGY VVSGFSRSVAAAAGGAGFIWLVLVVLYDLVLLALVVWDDGGLFSRQVFPWLLAANPADALRLFSVTASADQALVTGMGAA VAALPQGAALVSLLLWPLLGLALARLVFGRRVP
Sequences:
>Translated_273_residues MSALFAIAATEFRILRRNRWLVIATALLSVFALALTVSGATTSGALGVDLLTVSVASMTTLAVYLVPLVALLMSFEAIAG DAERGSLALVLTYPVSRGVLLAGKFLAHLLGLAIAVGIGFGLAGALAFALGGAGVSSGLALLRLMLGAVLLGAAFIALGY VVSGFSRSVAAAAGGAGFIWLVLVVLYDLVLLALVVWDDGGLFSRQVFPWLLAANPADALRLFSVTASADQALVTGMGAA VAALPQGAALVSLLLWPLLGLALARLVFGRRVP >Mature_272_residues SALFAIAATEFRILRRNRWLVIATALLSVFALALTVSGATTSGALGVDLLTVSVASMTTLAVYLVPLVALLMSFEAIAGD AERGSLALVLTYPVSRGVLLAGKFLAHLLGLAIAVGIGFGLAGALAFALGGAGVSSGLALLRLMLGAVLLGAAFIALGYV VSGFSRSVAAAAGGAGFIWLVLVVLYDLVLLALVVWDDGGLFSRQVFPWLLAANPADALRLFSVTASADQALVTGMGAAV AALPQGAALVSLLLWPLLGLALARLVFGRRVP
Specific function: Involved in copper processing [H]
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27729; Mature: 27597
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALFAIAATEFRILRRNRWLVIATALLSVFALALTVSGATTSGALGVDLLTVSVASMTT CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LAVYLVPLVALLMSFEAIAGDAERGSLALVLTYPVSRGVLLAGKFLAHLLGLAIAVGIGF HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH GLAGALAFALGGAGVSSGLALLRLMLGAVLLGAAFIALGYVVSGFSRSVAAAAGGAGFIW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LVLVVLYDLVLLALVVWDDGGLFSRQVFPWLLAANPADALRLFSVTASADQALVTGMGAA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH VAALPQGAALVSLLLWPLLGLALARLVFGRRVP HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SALFAIAATEFRILRRNRWLVIATALLSVFALALTVSGATTSGALGVDLLTVSVASMTT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LAVYLVPLVALLMSFEAIAGDAERGSLALVLTYPVSRGVLLAGKFLAHLLGLAIAVGIGF HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH GLAGALAFALGGAGVSSGLALLRLMLGAVLLGAAFIALGYVVSGFSRSVAAAAGGAGFIW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LVLVVLYDLVLLALVVWDDGGLFSRQVFPWLLAANPADALRLFSVTASADQALVTGMGAA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH VAALPQGAALVSLLLWPLLGLALARLVFGRRVP HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2170125 [H]