Click here to switch to the map view.

The map label for this gene is soxC

Identifier: 110678828

GI number: 110678828

Start: 1438660

End: 1439946

Strand: Direct

Name: soxC

Synonym: RD1_1516

Alternate gene names: NA

Gene position: 1438660-1439946 (Clockwise)

Preceding gene: 110678827

Following gene: 110678829

Centisome position: 34.81

GC content: 58.35

Gene sequence:

>1287_bases
ATGGCCGAGCATGACAACAAACCAGACGGCACCTCGCGGCGTGCGTTCTTGCGCGGGGCAGCAGCCGTTAGCGCGGGCGC
GCTGAGCGCGACAGCGGCGCGCAGCCAAACCCCCGACCCTTTGATCACCGAAGTGCAGGAATGGGCGCAGGGCTTTGGCG
ATGGCGTCGATGAAACCCCCTATGGTCTGCCCATCGCGCATGAACGTGACGTGATCCGTCGCAATGTCGAATGGCTGACG
GCGGATACGGTCAGTTCGATTAACTTCACGCCCATTCACGCATTGGACGGCACGATCACGCCGCAAGGCTGCGCGTTCGA
GCGTCATCATTCAGGCGCGATTGATCTGAAGAAAGAAGACTATCGCCTGATGATCAATGGTCTGGTCGATACCCCGCTGG
TCTTCACCTACGGCGATCTTGAACGCTTCCCGCGCGAAAACCACGTCTATTTCTGCGAATGTGCGGCGAATACCGGCATG
GAATGGGCCGGCGCGCAACTGAATGGCGCGCAATTCACCCATGGTATGATCCACAATATGGAATATACCGGCGTACCCCT
GCGCATGTTGCTGGAGGAAGCCGGGCTCGACACGGCGGGTGATCTCAAGGACAAATGGGTCTTTGTGGAAGGGGCGGATG
CCTCGTCCAATGGCCGCTCGATCCCCATGGAAAAGGCGCTGGATGATTGCCTGATCGCGTTCAAGGCCAATGGCGAAGCG
CTGCGCAAGGAACATGGCTATCCGGTGCGCCTTGTTGTGCCCGGATGGGAAGGCAACATGTGGGTGAAATGGATCCGCCG
CATCGAAGTGATGGACGGCCCCGTCGAAAGCCGCGAAGAGACGTCGAAATATACCGATACCCTTGCGGATGGTATCAGCC
GCAAGTGGACATGGGCGATGGATGCAAAGTCTGTCGTGACCAGCCCAAGCCCGCAATCCCCCATCACCCATGGCAAGGGA
CCGCTGGTGATCAGTGGTCTGGCATGGTCGGGCAATGGTGCTATCACCCGTGTCGATGTGTCCAAGGATGGCGGCATGAG
TTGGCAAACCGCGCGGCTTGCCAAACCGGGTGAGAAAATGGCCCTGACACGTTTTTACCTTGATACGGAGTGGGACGGGT
CGGAAATGCTGCTGCAGAGCCGGGCCATGGACGACACAGGATATGTACAGCCCACCAAGGCGCAGCTGCGCGAAGTGCGC
GGATTGAATTCGATTTACCACAACAACTGCATCCAGACATGGCTGGTACGCGCGAATGGAGAGACTGAAAATGTCGAAGT
TTCTTAA

Upstream 100 bases:

>100_bases
AGGCGCATATCGCCAAGCAGGGGGTCATCTCGCTTGATCCCAACAACAGTGTGCAAGTGGTCGGCGCATGAGCGGACCCA
AACGACAGGAGACAGGCGGC

Downstream 100 bases:

>100_bases
ATCAACCGTTGCCCTGACCGCGCTGTCCCTGATGGCCGCACCTGCGATGGCGGACAGGCTCGGCCTTGGCCGGGCGGCAC
TGCCCGAGGAAATCGCCGCG

Product: sulfite dehydrogenase SoxC protein

Products: sulfate; H2O2

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Oxidoreductase; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Nitrate Reductase / Sulfite Dehydrogenase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MAEHDNKPDGTSRRAFLRGAAAVSAGALSATAARSQTPDPLITEVQEWAQGFGDGVDETPYGLPIAHERDVIRRNVEWLT
ADTVSSINFTPIHALDGTITPQGCAFERHHSGAIDLKKEDYRLMINGLVDTPLVFTYGDLERFPRENHVYFCECAANTGM
EWAGAQLNGAQFTHGMIHNMEYTGVPLRMLLEEAGLDTAGDLKDKWVFVEGADASSNGRSIPMEKALDDCLIAFKANGEA
LRKEHGYPVRLVVPGWEGNMWVKWIRRIEVMDGPVESREETSKYTDTLADGISRKWTWAMDAKSVVTSPSPQSPITHGKG
PLVISGLAWSGNGAITRVDVSKDGGMSWQTARLAKPGEKMALTRFYLDTEWDGSEMLLQSRAMDDTGYVQPTKAQLREVR
GLNSIYHNNCIQTWLVRANGETENVEVS

Sequences:

>Translated_428_residues
MAEHDNKPDGTSRRAFLRGAAAVSAGALSATAARSQTPDPLITEVQEWAQGFGDGVDETPYGLPIAHERDVIRRNVEWLT
ADTVSSINFTPIHALDGTITPQGCAFERHHSGAIDLKKEDYRLMINGLVDTPLVFTYGDLERFPRENHVYFCECAANTGM
EWAGAQLNGAQFTHGMIHNMEYTGVPLRMLLEEAGLDTAGDLKDKWVFVEGADASSNGRSIPMEKALDDCLIAFKANGEA
LRKEHGYPVRLVVPGWEGNMWVKWIRRIEVMDGPVESREETSKYTDTLADGISRKWTWAMDAKSVVTSPSPQSPITHGKG
PLVISGLAWSGNGAITRVDVSKDGGMSWQTARLAKPGEKMALTRFYLDTEWDGSEMLLQSRAMDDTGYVQPTKAQLREVR
GLNSIYHNNCIQTWLVRANGETENVEVS
>Mature_427_residues
AEHDNKPDGTSRRAFLRGAAAVSAGALSATAARSQTPDPLITEVQEWAQGFGDGVDETPYGLPIAHERDVIRRNVEWLTA
DTVSSINFTPIHALDGTITPQGCAFERHHSGAIDLKKEDYRLMINGLVDTPLVFTYGDLERFPRENHVYFCECAANTGME
WAGAQLNGAQFTHGMIHNMEYTGVPLRMLLEEAGLDTAGDLKDKWVFVEGADASSNGRSIPMEKALDDCLIAFKANGEAL
RKEHGYPVRLVVPGWEGNMWVKWIRRIEVMDGPVESREETSKYTDTLADGISRKWTWAMDAKSVVTSPSPQSPITHGKGP
LVISGLAWSGNGAITRVDVSKDGGMSWQTARLAKPGEKMALTRFYLDTEWDGSEMLLQSRAMDDTGYVQPTKAQLREVRG
LNSIYHNNCIQTWLVRANGETENVEVS

Specific function: Unknown

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI74099704, Length=333, Percent_Identity=31.5315315315315, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI74099702, Length=333, Percent_Identity=31.5315315315315, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI74099694, Length=333, Percent_Identity=31.5315315315315, Blast_Score=102, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71992535, Length=393, Percent_Identity=29.0076335877863, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI18859905, Length=349, Percent_Identity=28.9398280802292, Blast_Score=114, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.8.3.1

Molecular weight: Translated: 47261; Mature: 47129

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHDNKPDGTSRRAFLRGAAAVSAGALSATAARSQTPDPLITEVQEWAQGFGDGVDETP
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
YGLPIAHERDVIRRNVEWLTADTVSSINFTPIHALDGTITPQGCAFERHHSGAIDLKKED
CCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEECCC
YRLMINGLVDTPLVFTYGDLERFPRENHVYFCECAANTGMEWAGAQLNGAQFTHGMIHNM
EEEEEECCCCCCEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHCCC
EYTGVPLRMLLEEAGLDTAGDLKDKWVFVEGADASSNGRSIPMEKALDDCLIAFKANGEA
CCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEEEEEECCCHH
LRKEHGYPVRLVVPGWEGNMWVKWIRRIEVMDGPVESREETSKYTDTLADGISRKWTWAM
HHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
DAKSVVTSPSPQSPITHGKGPLVISGLAWSGNGAITRVDVSKDGGMSWQTARLAKPGEKM
CCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEHHHCCCCCCE
ALTRFYLDTEWDGSEMLLQSRAMDDTGYVQPTKAQLREVRGLNSIYHNNCIQTWLVRANG
EEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC
ETENVEVS
CCCCEEEC
>Mature Secondary Structure 
AEHDNKPDGTSRRAFLRGAAAVSAGALSATAARSQTPDPLITEVQEWAQGFGDGVDETP
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
YGLPIAHERDVIRRNVEWLTADTVSSINFTPIHALDGTITPQGCAFERHHSGAIDLKKED
CCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEEECCC
YRLMINGLVDTPLVFTYGDLERFPRENHVYFCECAANTGMEWAGAQLNGAQFTHGMIHNM
EEEEEECCCCCCEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHCCC
EYTGVPLRMLLEEAGLDTAGDLKDKWVFVEGADASSNGRSIPMEKALDDCLIAFKANGEA
CCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEEEEEECCCHH
LRKEHGYPVRLVVPGWEGNMWVKWIRRIEVMDGPVESREETSKYTDTLADGISRKWTWAM
HHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
DAKSVVTSPSPQSPITHGKGPLVISGLAWSGNGAITRVDVSKDGGMSWQTARLAKPGEKM
CCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEHHHCCCCCCE
ALTRFYLDTEWDGSEMLLQSRAMDDTGYVQPTKAQLREVRGLNSIYHNNCIQTWLVRANG
EEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC
ETENVEVS
CCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sulfite; O2; H2O

Specific reaction: sulfite + O2 + H2O = sulfate + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA