Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678804

Identifier: 110678804

GI number: 110678804

Start: 1417733

End: 1417831

Strand: Direct

Name: 110678804

Synonym: RD1_1492

Alternate gene names: NA

Gene position: 1417733-1417831 (Clockwise)

Preceding gene: 110678803

Following gene: 110678805

Centisome position: 34.3

GC content: 52.53

Gene sequence:

>99_bases
GTGATGAAGTCGACAACCCGTCAGCCCTTTGAAACACGCGCGCGGATTGGGCATCTGCCAGTGGTCAATGTGGTTGCTTC
ATATCATTGCCTGCACTAA

Upstream 100 bases:

>100_bases
AACCAGAGTGTTTCATCCAGTCGCTGAGACTGCTGTTTTATCCGGGTTGACAGTGTTCTCACCGTTTCGCGCAGCAGGTT
CTGAACGATAAATATCAGTC

Downstream 100 bases:

>100_bases
CGCTGGGACAGGTTTCTGCTTAATCCCCGAACAAGGCTCGCTATGTCCGAACGTGTCAATTCCACACCACTGGAGACCAT
TTTAAGCAGGATAACGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 32; Mature: 32

Protein sequence:

>32_residues
MMKSTTRQPFETRARIGHLPVVNVVASYHCLH

Sequences:

>Translated_32_residues
MMKSTTRQPFETRARIGHLPVVNVVASYHCLH
>Mature_32_residues
MMKSTTRQPFETRARIGHLPVVNVVASYHCLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3680; Mature: 3680

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSTTRQPFETRARIGHLPVVNVVASYHCLH
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MMKSTTRQPFETRARIGHLPVVNVVASYHCLH
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA