Click here to switch to the map view.

The map label for this gene is 110678722

Identifier: 110678722

GI number: 110678722

Start: 1344977

End: 1345894

Strand: Direct

Name: 110678722

Synonym: RD1_1403

Alternate gene names: NA

Gene position: 1344977-1345894 (Clockwise)

Preceding gene: 110678721

Following gene: 110678724

Centisome position: 32.54

GC content: 60.02

Gene sequence:

>918_bases
ATGGAGAACGGCGTCTTGCGCATTGATCTGCCTTTGAGAACGATCTGTTGCGCTCTTGTGTTTTGCGCCACCAGCTCTGT
TGGTCTCGCGCAGGACCGCGCCGGGTGGCGCGCCCAGCTTGAGGCGCTCACCGTGTTCCAAGGGGATACGGACCTCAGCA
AAGGCGGCAGCTTTTCGTCATCCCGCACGTTTGTGCGCGGCAGTTCCATATACAGTTTTGACAACGACACATCTGTTGGG
GTCTCCGCCAGCTTTGGGCTGTTCGACTATGATTTTGGCGATGCGGCGCAACGACCATGGGATGATATTCAGGACATCCG
CCTGTCGATCCCCACGCGGTTTCGCGCCAGTGAAACGGCAACCGTGTTCCTGTCGCCTCAGGTCCGGTGGGATTATGAGA
GCGGGGCCGACAGGTCGGACAGCACGACCTACGGCATTTTCGGCGGCGTGGCATGGACGATCAGTGATAGCCTTACGATT
GGCCCGGCCTTTGGCGCCTATAGTCAGTTGGAAGAAAGTGGTGCCGATGTGTTTCCGGCGATTCTGGTTGATTGGGACAT
CACCAAGCGCTGGAACCTGAACACGGGCGCGGGCCTTGGTGCGACGGGCGGTCCGGGGCTGACCCTGGGATATAAGCTGA
GCGATACGTCGCAGCTTTCCCTGTCCGCGCGTTCTGAAAGCGTGCGCTTTCGGCTTGATGACAAGGGCCTTGCACCAGAT
GGCGTGGGCGAGGACGAAAGCATCCCTGTCGTGATCTCCTACCAGTACAACCCCAACCCCGGCCTGTCGCTCAGCGCCTT
TGTGGGGGCAGAATTTGACGGGCGGCTCAGGCTGGATGACGCCTCGGGCAATCAAATCAGCAGCCAATCCTACGACACAG
CCCCGCTTGGCGGTCTCGCCGTGCGGTTCAGGTTCTGA

Upstream 100 bases:

>100_bases
GTTTTAACCGTCCTGTTGCGGACAGGGTCGCGACATAAATCACGCGCCATGATTGAATGTAGGCGGCTGCGCGTTAGTTT
GTTACACTGAAGCAGAACTG

Downstream 100 bases:

>100_bases
TCGGATTTTCCATGTATGGACAGGTCGGATTATGGGCCATATCGGTCAGCTTGACCGCCACACTACCAAATTAGTCGTCT
TATTGCCCGACACCGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MENGVLRIDLPLRTICCALVFCATSSVGLAQDRAGWRAQLEALTVFQGDTDLSKGGSFSSSRTFVRGSSIYSFDNDTSVG
VSASFGLFDYDFGDAAQRPWDDIQDIRLSIPTRFRASETATVFLSPQVRWDYESGADRSDSTTYGIFGGVAWTISDSLTI
GPAFGAYSQLEESGADVFPAILVDWDITKRWNLNTGAGLGATGGPGLTLGYKLSDTSQLSLSARSESVRFRLDDKGLAPD
GVGEDESIPVVISYQYNPNPGLSLSAFVGAEFDGRLRLDDASGNQISSQSYDTAPLGGLAVRFRF

Sequences:

>Translated_305_residues
MENGVLRIDLPLRTICCALVFCATSSVGLAQDRAGWRAQLEALTVFQGDTDLSKGGSFSSSRTFVRGSSIYSFDNDTSVG
VSASFGLFDYDFGDAAQRPWDDIQDIRLSIPTRFRASETATVFLSPQVRWDYESGADRSDSTTYGIFGGVAWTISDSLTI
GPAFGAYSQLEESGADVFPAILVDWDITKRWNLNTGAGLGATGGPGLTLGYKLSDTSQLSLSARSESVRFRLDDKGLAPD
GVGEDESIPVVISYQYNPNPGLSLSAFVGAEFDGRLRLDDASGNQISSQSYDTAPLGGLAVRFRF
>Mature_305_residues
MENGVLRIDLPLRTICCALVFCATSSVGLAQDRAGWRAQLEALTVFQGDTDLSKGGSFSSSRTFVRGSSIYSFDNDTSVG
VSASFGLFDYDFGDAAQRPWDDIQDIRLSIPTRFRASETATVFLSPQVRWDYESGADRSDSTTYGIFGGVAWTISDSLTI
GPAFGAYSQLEESGADVFPAILVDWDITKRWNLNTGAGLGATGGPGLTLGYKLSDTSQLSLSARSESVRFRLDDKGLAPD
GVGEDESIPVVISYQYNPNPGLSLSAFVGAEFDGRLRLDDASGNQISSQSYDTAPLGGLAVRFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32741; Mature: 32741

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENGVLRIDLPLRTICCALVFCATSSVGLAQDRAGWRAQLEALTVFQGDTDLSKGGSFSS
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
SRTFVRGSSIYSFDNDTSVGVSASFGLFDYDFGDAAQRPWDDIQDIRLSIPTRFRASETA
CCEEEECCEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCHHHHEEECCCEECCCCEE
TVFLSPQVRWDYESGADRSDSTTYGIFGGVAWTISDSLTIGPAFGAYSQLEESGADVFPA
EEEECCCEEECCCCCCCCCCCEEEEEECCEEEEEECCEEECCCCCCHHHHHHCCCCCCEE
ILVDWDITKRWNLNTGAGLGATGGPGLTLGYKLSDTSQLSLSARSESVRFRLDDKGLAPD
EEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCC
GVGEDESIPVVISYQYNPNPGLSLSAFVGAEFDGRLRLDDASGNQISSQSYDTAPLGGLA
CCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE
VRFRF
EEEEC
>Mature Secondary Structure
MENGVLRIDLPLRTICCALVFCATSSVGLAQDRAGWRAQLEALTVFQGDTDLSKGGSFSS
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
SRTFVRGSSIYSFDNDTSVGVSASFGLFDYDFGDAAQRPWDDIQDIRLSIPTRFRASETA
CCEEEECCEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCHHHHEEECCCEECCCCEE
TVFLSPQVRWDYESGADRSDSTTYGIFGGVAWTISDSLTIGPAFGAYSQLEESGADVFPA
EEEECCCEEECCCCCCCCCCCEEEEEECCEEEEEECCEEECCCCCCHHHHHHCCCCCCEE
ILVDWDITKRWNLNTGAGLGATGGPGLTLGYKLSDTSQLSLSARSESVRFRLDDKGLAPD
EEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCC
GVGEDESIPVVISYQYNPNPGLSLSAFVGAEFDGRLRLDDASGNQISSQSYDTAPLGGLA
CCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEE
VRFRF
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA