| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678703
Identifier: 110678703
GI number: 110678703
Start: 1327917
End: 1328795
Strand: Direct
Name: 110678703
Synonym: RD1_1384
Alternate gene names: NA
Gene position: 1327917-1328795 (Clockwise)
Preceding gene: 110678702
Following gene: 110678705
Centisome position: 32.13
GC content: 57.0
Gene sequence:
>879_bases GTGGTAGAAAGTTCGCAGGAATTCAGCCAAGATCAACAAGCGAAACCGGTAGACTTTCAAAAGTATGACCGCAGCGCGAT TTCCTATGCTTCAACATTTGAAGACCCCTGGAAGGCGACCTTTATCCGTGTCGTTGAGACATTCACCGGCCGGCTGAGAA TTCTGCGCCTCGTGCGGGAATTCGAACGTCGCGGTGCACCGCAAGGTCAGGCGTTTTGGCGTGCGGCGCTGGATGTGATG GGGATTGAACTGCAAACCCCCCAGAACCAGCTTGACCGTATTCCCAAAACAGGGCCTTTGATCGTGGTGTCAAACCATCC GCATGGGATGGTCGACGGCATGATTTTTGCGGACCTTATCGGGCGGGTGCGTCCCGATTACCGCATTCTGACCCGCTCTC TTTTGACTGTTATCGACGAGGTCGCAGGGTCCTACATGATCCCTGTGCCCTTTCCGCACGATCCTGATGCACAGCGCAAG GGTGTGGCGATGCGGGCGCATGCGATGGAGCATTTGAAAAACGGCGGCGTCGTGGCTTTGTTTCCCTCCGGTGGCGTGGC GTCGTCGGAGACCTTCTTTGGCCCCGCGATTGAGGGCGAATGGAATGTCTTTACGGCCAAGATGATCCGGCGCTCCGGTG CGACGGTTCTACCGATTAAATTCCCCGGCCAGAACTCGCGCGCCTATCAGATCGCGAACCAGCTTTCGCCGATGCTGCGT CAGGGGTTGCTGTTGCATGAAATCGTGCACGCGTTGAACAAACCGCAGGCACCCATCGTCGGGCATCCGATAGACCCTGA TGAGATCATCAAGCGGCAGGATGACCCGCGCGCCTTCATGGCATGGTTGCGCGATCACACCCTGTCGTTGACGGATTAA
Upstream 100 bases:
>100_bases GAAGCGCTTGCAGAAGCGCTCACCGCGTTGGTTGCAAACCGCTTCGGGGAAGAGACTTAACGCGTCAGCCCTTTGACCTT ACGAACTGAAGGATAACTTC
Downstream 100 bases:
>100_bases CCCCTATCGCGTTGGAACGGGCGTGTCGCCACGGTAATCGTAAAACCCGCGCTGGGTTTTTCGGCCCAGCCACCCCGCCT CCACATATTTCGTGAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase; Phosphate Acyltransferase Family Protein; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVREFERRGAPQGQAFWRAALDVM GIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLIGRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRK GVAMRAHAMEHLKNGGVVALFPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD
Sequences:
>Translated_292_residues MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVREFERRGAPQGQAFWRAALDVM GIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLIGRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRK GVAMRAHAMEHLKNGGVVALFPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD >Mature_292_residues MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVREFERRGAPQGQAFWRAALDVM GIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLIGRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRK GVAMRAHAMEHLKNGGVVALFPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32773; Mature: 32773
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVRE CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FERRGAPQGQAFWRAALDVMGIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLI HHHCCCCCHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH GRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRKGVAMRAHAMEHLKNGGVVAL HHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEE FPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVRE CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FERRGAPQGQAFWRAALDVMGIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLI HHHCCCCCHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH GRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRKGVAMRAHAMEHLKNGGVVAL HHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEE FPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA