The gene/protein map for NC_008209 is currently unavailable.
Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110678703

Identifier: 110678703

GI number: 110678703

Start: 1327917

End: 1328795

Strand: Direct

Name: 110678703

Synonym: RD1_1384

Alternate gene names: NA

Gene position: 1327917-1328795 (Clockwise)

Preceding gene: 110678702

Following gene: 110678705

Centisome position: 32.13

GC content: 57.0

Gene sequence:

>879_bases
GTGGTAGAAAGTTCGCAGGAATTCAGCCAAGATCAACAAGCGAAACCGGTAGACTTTCAAAAGTATGACCGCAGCGCGAT
TTCCTATGCTTCAACATTTGAAGACCCCTGGAAGGCGACCTTTATCCGTGTCGTTGAGACATTCACCGGCCGGCTGAGAA
TTCTGCGCCTCGTGCGGGAATTCGAACGTCGCGGTGCACCGCAAGGTCAGGCGTTTTGGCGTGCGGCGCTGGATGTGATG
GGGATTGAACTGCAAACCCCCCAGAACCAGCTTGACCGTATTCCCAAAACAGGGCCTTTGATCGTGGTGTCAAACCATCC
GCATGGGATGGTCGACGGCATGATTTTTGCGGACCTTATCGGGCGGGTGCGTCCCGATTACCGCATTCTGACCCGCTCTC
TTTTGACTGTTATCGACGAGGTCGCAGGGTCCTACATGATCCCTGTGCCCTTTCCGCACGATCCTGATGCACAGCGCAAG
GGTGTGGCGATGCGGGCGCATGCGATGGAGCATTTGAAAAACGGCGGCGTCGTGGCTTTGTTTCCCTCCGGTGGCGTGGC
GTCGTCGGAGACCTTCTTTGGCCCCGCGATTGAGGGCGAATGGAATGTCTTTACGGCCAAGATGATCCGGCGCTCCGGTG
CGACGGTTCTACCGATTAAATTCCCCGGCCAGAACTCGCGCGCCTATCAGATCGCGAACCAGCTTTCGCCGATGCTGCGT
CAGGGGTTGCTGTTGCATGAAATCGTGCACGCGTTGAACAAACCGCAGGCACCCATCGTCGGGCATCCGATAGACCCTGA
TGAGATCATCAAGCGGCAGGATGACCCGCGCGCCTTCATGGCATGGTTGCGCGATCACACCCTGTCGTTGACGGATTAA

Upstream 100 bases:

>100_bases
GAAGCGCTTGCAGAAGCGCTCACCGCGTTGGTTGCAAACCGCTTCGGGGAAGAGACTTAACGCGTCAGCCCTTTGACCTT
ACGAACTGAAGGATAACTTC

Downstream 100 bases:

>100_bases
CCCCTATCGCGTTGGAACGGGCGTGTCGCCACGGTAATCGTAAAACCCGCGCTGGGTTTTTCGGCCCAGCCACCCCGCCT
CCACATATTTCGTGAGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase; Phosphate Acyltransferase Family Protein; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVREFERRGAPQGQAFWRAALDVM
GIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLIGRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRK
GVAMRAHAMEHLKNGGVVALFPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR
QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD

Sequences:

>Translated_292_residues
MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVREFERRGAPQGQAFWRAALDVM
GIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLIGRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRK
GVAMRAHAMEHLKNGGVVALFPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR
QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD
>Mature_292_residues
MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVREFERRGAPQGQAFWRAALDVM
GIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLIGRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRK
GVAMRAHAMEHLKNGGVVALFPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR
QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD

Specific function: Unknown

COG id: COG3176

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32773; Mature: 32773

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVRE
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FERRGAPQGQAFWRAALDVMGIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLI
HHHCCCCCHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
GRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRKGVAMRAHAMEHLKNGGVVAL
HHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEE
FPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVESSQEFSQDQQAKPVDFQKYDRSAISYASTFEDPWKATFIRVVETFTGRLRILRLVRE
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FERRGAPQGQAFWRAALDVMGIELQTPQNQLDRIPKTGPLIVVSNHPHGMVDGMIFADLI
HHHCCCCCHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
GRVRPDYRILTRSLLTVIDEVAGSYMIPVPFPHDPDAQRKGVAMRAHAMEHLKNGGVVAL
HHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEE
FPSGGVASSETFFGPAIEGEWNVFTAKMIRRSGATVLPIKFPGQNSRAYQIANQLSPMLR
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
QGLLLHEIVHALNKPQAPIVGHPIDPDEIIKRQDDPRAFMAWLRDHTLSLTD
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA