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The map label for this gene is ycgM [C]

Identifier: 110678669

GI number: 110678669

Start: 1300610

End: 1301293

Strand: Reverse

Name: ycgM [C]

Synonym: RD1_1348

Alternate gene names: 110678669

Gene position: 1301293-1300610 (Counterclockwise)

Preceding gene: 110678670

Following gene: 110678668

Centisome position: 31.48

GC content: 59.8

Gene sequence:

>684_bases
ATGTCAGATTTCGTTATTCCAGTGCCGCCAACCGCCTGTGTCCCCGTGGCAAGCGGGGGCATGTTTCCGGTCCGGCGCGT
CTATTGCATCGGGCGCAACTATGCCGCTCATGCCGTGGAGATGGGCCATGACCCGGAGCGCGAAGCACCCTTCTTTTTCC
AGAAAAACCCCGATGATCTGAACACATCCGGATCATTCCCCTACCCTGCGCAAAGCAGCGACGTGCACCATGAGGCCGAA
GTCGCCGTGTTCCTGAAATCGGGCGGCACCAACATCAGCCCCGATGACGCGCTGGATCACGTTTACGGCTACGCGCTATG
CCTCGACATGACCCGCCGCGATTTACAGGGCATCGCAAAAAAGGCCGGGCGTCCGTGGGAGATCGGCAAGGCCTTTCATG
CCTCGGCACCGGTCGGGCCAGTCCACAGGGTGGCGGAGGTCGGCCACCTTGATCAGGGCAGGATTACCCTGCATCTGAAC
GGCGTACTCAAGCAAGATGGTGATCTGAACCAGATGATCTGGAAAGTGCCGGAAATGATCTCCTACCTGTCCGAATACTA
CACGCTTGCACCCGGTGATGTAATCCTGTCGGGCACACCCGCGGGCGTGGGGCCGGTTCAAAAAGGCGACGCCATGACGA
TTGCGGTCGAGGGCCTAGGCAAGATGACGATCACCGTCACCTGA

Upstream 100 bases:

>100_bases
TTTGAATGGCGCGCAGGCGACCCGATGTCCTGTACTGCAATCACGCGCTGACACGCAATTTGTGCCAGTAACCTCAAAGA
AGATTTGCGGGGAACCCTTC

Downstream 100 bases:

>100_bases
CCTGCGAAAAGACAAAAGAACCCCCGGATTTCACGGCCCACCCGTGCGGAACACGCGCAAAGTGACGCAAGGATAGACTC
GCGTTTCAAGGTCTTTCGTC

Product: fumarylacetoacetate hydrolase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSDFVIPVPPTACVPVASGGMFPVRRVYCIGRNYAAHAVEMGHDPEREAPFFFQKNPDDLNTSGSFPYPAQSSDVHHEAE
VAVFLKSGGTNISPDDALDHVYGYALCLDMTRRDLQGIAKKAGRPWEIGKAFHASAPVGPVHRVAEVGHLDQGRITLHLN
GVLKQDGDLNQMIWKVPEMISYLSEYYTLAPGDVILSGTPAGVGPVQKGDAMTIAVEGLGKMTITVT

Sequences:

>Translated_227_residues
MSDFVIPVPPTACVPVASGGMFPVRRVYCIGRNYAAHAVEMGHDPEREAPFFFQKNPDDLNTSGSFPYPAQSSDVHHEAE
VAVFLKSGGTNISPDDALDHVYGYALCLDMTRRDLQGIAKKAGRPWEIGKAFHASAPVGPVHRVAEVGHLDQGRITLHLN
GVLKQDGDLNQMIWKVPEMISYLSEYYTLAPGDVILSGTPAGVGPVQKGDAMTIAVEGLGKMTITVT
>Mature_226_residues
SDFVIPVPPTACVPVASGGMFPVRRVYCIGRNYAAHAVEMGHDPEREAPFFFQKNPDDLNTSGSFPYPAQSSDVHHEAEV
AVFLKSGGTNISPDDALDHVYGYALCLDMTRRDLQGIAKKAGRPWEIGKAFHASAPVGPVHRVAEVGHLDQGRITLHLNG
VLKQDGDLNQMIWKVPEMISYLSEYYTLAPGDVILSGTPAGVGPVQKGDAMTIAVEGLGKMTITVT

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=203, Percent_Identity=39.9014778325123, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI215422413, Length=200, Percent_Identity=39.5, Blast_Score=147, Evalue=5e-36,
Organism=Homo sapiens, GI66348062, Length=196, Percent_Identity=39.7959183673469, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI156231349, Length=208, Percent_Identity=35.5769230769231, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI40786394, Length=228, Percent_Identity=33.7719298245614, Blast_Score=115, Evalue=3e-26,
Organism=Escherichia coli, GI1787428, Length=198, Percent_Identity=37.8787878787879, Blast_Score=145, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=34.375, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6324161, Length=219, Percent_Identity=34.2465753424658, Blast_Score=125, Evalue=6e-30,
Organism=Drosophila melanogaster, GI28571789, Length=205, Percent_Identity=32.6829268292683, Blast_Score=113, Evalue=8e-26,
Organism=Drosophila melanogaster, GI28572127, Length=208, Percent_Identity=31.7307692307692, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24663695, Length=172, Percent_Identity=33.7209302325581, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24458; Mature: 24327

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFVIPVPPTACVPVASGGMFPVRRVYCIGRNYAAHAVEMGHDPEREAPFFFQKNPDDL
CCCCEECCCCCCEEEECCCCCCHHEEEEEECCCCHHHHEECCCCCCCCCCEEEECCCCCC
NTSGSFPYPAQSSDVHHEAEVAVFLKSGGTNISPDDALDHVYGYALCLDMTRRDLQGIAK
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGRPWEIGKAFHASAPVGPVHRVAEVGHLDQGRITLHLNGVLKQDGDLNQMIWKVPEMI
HCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHH
SYLSEYYTLAPGDVILSGTPAGVGPVQKGDAMTIAVEGLGKMTITVT
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEC
>Mature Secondary Structure 
SDFVIPVPPTACVPVASGGMFPVRRVYCIGRNYAAHAVEMGHDPEREAPFFFQKNPDDL
CCCEECCCCCCEEEECCCCCCHHEEEEEECCCCHHHHEECCCCCCCCCCEEEECCCCCC
NTSGSFPYPAQSSDVHHEAEVAVFLKSGGTNISPDDALDHVYGYALCLDMTRRDLQGIAK
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGRPWEIGKAFHASAPVGPVHRVAEVGHLDQGRITLHLNGVLKQDGDLNQMIWKVPEMI
HCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHH
SYLSEYYTLAPGDVILSGTPAGVGPVQKGDAMTIAVEGLGKMTITVT
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]