Click here to switch to the map view.

The map label for this gene is 110678668

Identifier: 110678668

GI number: 110678668

Start: 1299336

End: 1300454

Strand: Reverse

Name: 110678668

Synonym: RD1_1347

Alternate gene names: NA

Gene position: 1300454-1299336 (Counterclockwise)

Preceding gene: 110678669

Following gene: 110678666

Centisome position: 31.46

GC content: 60.86

Gene sequence:

>1119_bases
ATGAAACATCTTGCGATACTGGGTGCGGCAGCACTTTTGGCCGCCCCGGCACAGGCATCACCGCTCACAGATCAGTTCAG
CAGCTTTTCCGTCCTCGGCGACAGCCTGTCGGATATCGGGAACACCGAACGGCTTTTGGGCATTCTGGCGCCGCCGGCAC
CGCCCTCGACAACCCCGCCAACCGATGCAGAGACCAATTTCGCCCGACTGCGCGCACCGGGTGTCTTTTCCGACGGTCCG
ACCTGGGCTGCCGGTTTGACGAATGAGTTTCGCAACAACGGGAAAACCGGCGTAAACCTGTCTTTCGCAGGGGCGCTGGC
CGCAAATAACTGGGATCCTGTCCCCGATCTTCTGGCACAGATTTTCGCCCCTGCAAACTTGCCGCTACCGGTCACACCCC
CGGTCTCTACCTATGCGGATGGGCTGGGCGGGTTGCTGAACGCGCCAACAGCACCGGGCATGCCGCCAACGCTTAATGCT
GCGCGCAACCTTGGCACCACCCCCTTGGTCAGCGTCTTTATCGGCGGGAATGACTTTCTGAATGCGGCAAACAGCATTGA
CAGCGCTGCACCTGATTTCACGGCACTGAAAACCGCGTTAGGTAGCGCTTTGACGACCGTACAAGGCGGGTTGCAGGCCT
TGGCGGGCGCCGGGGTGCGGGATTTCGTCGTCATGAACCTGCCGGACTTTGGCCTGATCCCAAGGTTCCAGAACGAAGCA
CCCGCGTTTCAGGACCAGCTTTCAGCGATGGCGGCCGACTACAACACGCAGCTCTCCGCCTTCTTGCAGGGCAACAACCT
ATTTGGCGCGACCGTGACCGAAGTGGACGTCTTTGACGCCCTGAGCGATCAGGCATTGCTGGCGTCTCGCGGCATCACGG
ACACGCAGAATGCCTGCGTTCAAACTGTCTCGACCACGGCTCCGTCCTGTGCGGGCTTCCTGTTTTTCGACGACATTCAC
CCCACCGCCGCAGGTCACGCGCTGATCAACGACATCACCCGCGCAGCGCTGAACGACACCTATCAACTGGCCCCTGTCCC
GCTGCCAGCCTCTGTGCTGTTGTTGCTCTCTGCCCTTGGCGGCACATTTGTCTTGCGGCGTCGCAAACGGGCAAGCTGA

Upstream 100 bases:

>100_bases
CGCAAAGTGACGCAAGGATAGACTCGCGTTTCAAGGTCTTTCGTCGTCTATTTCCCATCGTGCGCAGGAAAACATGCGCA
GCTTACAGGGAGAGGATCAA

Downstream 100 bases:

>100_bases
AACGTCAATGCGCCGGGGCGAGCCCCGGCGCTTCTCGATCATGCATTGCAGCCATCCATCCCGACCCGCGCAATCGCATC
CGCACCAAAAGTGGCCTCGC

Product: lipase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKHLAILGAAALLAAPAQASPLTDQFSSFSVLGDSLSDIGNTERLLGILAPPAPPSTTPPTDAETNFARLRAPGVFSDGP
TWAAGLTNEFRNNGKTGVNLSFAGALAANNWDPVPDLLAQIFAPANLPLPVTPPVSTYADGLGGLLNAPTAPGMPPTLNA
ARNLGTTPLVSVFIGGNDFLNAANSIDSAAPDFTALKTALGSALTTVQGGLQALAGAGVRDFVVMNLPDFGLIPRFQNEA
PAFQDQLSAMAADYNTQLSAFLQGNNLFGATVTEVDVFDALSDQALLASRGITDTQNACVQTVSTTAPSCAGFLFFDDIH
PTAAGHALINDITRAALNDTYQLAPVPLPASVLLLLSALGGTFVLRRRKRAS

Sequences:

>Translated_372_residues
MKHLAILGAAALLAAPAQASPLTDQFSSFSVLGDSLSDIGNTERLLGILAPPAPPSTTPPTDAETNFARLRAPGVFSDGP
TWAAGLTNEFRNNGKTGVNLSFAGALAANNWDPVPDLLAQIFAPANLPLPVTPPVSTYADGLGGLLNAPTAPGMPPTLNA
ARNLGTTPLVSVFIGGNDFLNAANSIDSAAPDFTALKTALGSALTTVQGGLQALAGAGVRDFVVMNLPDFGLIPRFQNEA
PAFQDQLSAMAADYNTQLSAFLQGNNLFGATVTEVDVFDALSDQALLASRGITDTQNACVQTVSTTAPSCAGFLFFDDIH
PTAAGHALINDITRAALNDTYQLAPVPLPASVLLLLSALGGTFVLRRRKRAS
>Mature_372_residues
MKHLAILGAAALLAAPAQASPLTDQFSSFSVLGDSLSDIGNTERLLGILAPPAPPSTTPPTDAETNFARLRAPGVFSDGP
TWAAGLTNEFRNNGKTGVNLSFAGALAANNWDPVPDLLAQIFAPANLPLPVTPPVSTYADGLGGLLNAPTAPGMPPTLNA
ARNLGTTPLVSVFIGGNDFLNAANSIDSAAPDFTALKTALGSALTTVQGGLQALAGAGVRDFVVMNLPDFGLIPRFQNEA
PAFQDQLSAMAADYNTQLSAFLQGNNLFGATVTEVDVFDALSDQALLASRGITDTQNACVQTVSTTAPSCAGFLFFDDIH
PTAAGHALINDITRAALNDTYQLAPVPLPASVLLLLSALGGTFVLRRRKRAS

Specific function: Unknown

COG id: COG3240

COG function: function code IR; Phospholipase/lecithinase/hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38306; Mature: 38306

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLAILGAAALLAAPAQASPLTDQFSSFSVLGDSLSDIGNTERLLGILAPPAPPSTTPP
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCC
TDAETNFARLRAPGVFSDGPTWAAGLTNEFRNNGKTGVNLSFAGALAANNWDPVPDLLAQ
CCCCCCHHHEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECEEECCCCCCHHHHHHH
IFAPANLPLPVTPPVSTYADGLGGLLNAPTAPGMPPTLNAARNLGTTPLVSVFIGGNDFL
HHCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCHHHHHCCCCCCEEEEEECCHHHH
NAANSIDSAAPDFTALKTALGSALTTVQGGLQALAGAGVRDFVVMNLPDFGLIPRFQNEA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCC
PAFQDQLSAMAADYNTQLSAFLQGNNLFGATVTEVDVFDALSDQALLASRGITDTQNACV
CHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
QTVSTTAPSCAGFLFFDDIHPTAAGHALINDITRAALNDTYQLAPVPLPASVLLLLSALG
HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHC
GTFVLRRRKRAS
HHHHHHHHHCCC
>Mature Secondary Structure
MKHLAILGAAALLAAPAQASPLTDQFSSFSVLGDSLSDIGNTERLLGILAPPAPPSTTPP
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCC
TDAETNFARLRAPGVFSDGPTWAAGLTNEFRNNGKTGVNLSFAGALAANNWDPVPDLLAQ
CCCCCCHHHEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECEEECCCCCCHHHHHHH
IFAPANLPLPVTPPVSTYADGLGGLLNAPTAPGMPPTLNAARNLGTTPLVSVFIGGNDFL
HHCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCHHHHHCCCCCCEEEEEECCHHHH
NAANSIDSAAPDFTALKTALGSALTTVQGGLQALAGAGVRDFVVMNLPDFGLIPRFQNEA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCC
PAFQDQLSAMAADYNTQLSAFLQGNNLFGATVTEVDVFDALSDQALLASRGITDTQNACV
CHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
QTVSTTAPSCAGFLFFDDIHPTAAGHALINDITRAALNDTYQLAPVPLPASVLLLLSALG
HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHC
GTFVLRRRKRAS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA