| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is osp
Identifier: 110678654
GI number: 110678654
Start: 1284150
End: 1284536
Strand: Direct
Name: osp
Synonym: RD1_1333
Alternate gene names: NA
Gene position: 1284150-1284536 (Clockwise)
Preceding gene: 110678650
Following gene: 110678656
Centisome position: 31.07
GC content: 57.11
Gene sequence:
>387_bases ATGAAAGTCCTGATCGTTGAAAGCGAGGATGGTCTGGCCAGGATTTGGCAGAAGCATCTCCAGCGAATGGGGATGCATGT CTGCTGTGCGGGGGGTGAGACCGATGCTATTGCGCATCTGAGCGAACATCCGACAGATATCATTATTCTCGATCTTGTGC TGGCGGAGGGCTGTGCCTTGGCGGTGGCAGATTATGCAAGCTACCGGTTGCCCGACGCACGGGTGGTCTTTGTCACCAAT ACGTCCTTCTTTTCGGATGGGTCGATATTCTCCTTTGCGCCCAATGCCTGCGCCTTTGTGCAAAGTGCGACACCACCAGA AGACCTTGCCGCCATTGTCGAGCACTATGGCCCGGCGGAGGATCCGGCACCCCACGGCGTCGCGTGA
Upstream 100 bases:
>100_bases TAAGAATTAAGGCAAGTTCTTAACCGTTTCTTAATCTTTGGGGCACACCTATTACGTGTTGTTTCAAAAAAGTGTTTTAT CGCGCCGGAATGGAGGCTGC
Downstream 100 bases:
>100_bases TCCAAAGGCGCGCCTGCGGCGCACGACATTTTTTATTCACCCGGCAGGTACCGCTGCGCACCGCCGGGTGCGGCAGGCTC AGCCGCGCCCGTGGGGTCTG
Product: response regulator, putative
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKVLIVESEDGLARIWQKHLQRMGMHVCCAGGETDAIAHLSEHPTDIIILDLVLAEGCALAVADYASYRLPDARVVFVTN TSFFSDGSIFSFAPNACAFVQSATPPEDLAAIVEHYGPAEDPAPHGVA
Sequences:
>Translated_128_residues MKVLIVESEDGLARIWQKHLQRMGMHVCCAGGETDAIAHLSEHPTDIIILDLVLAEGCALAVADYASYRLPDARVVFVTN TSFFSDGSIFSFAPNACAFVQSATPPEDLAAIVEHYGPAEDPAPHGVA >Mature_128_residues MKVLIVESEDGLARIWQKHLQRMGMHVCCAGGETDAIAHLSEHPTDIIILDLVLAEGCALAVADYASYRLPDARVVFVTN TSFFSDGSIFSFAPNACAFVQSATPPEDLAAIVEHYGPAEDPAPHGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13682; Mature: 13682
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIVESEDGLARIWQKHLQRMGMHVCCAGGETDAIAHLSEHPTDIIILDLVLAEGCAL CEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCEEEEEHHHHCCCCE AVADYASYRLPDARVVFVTNTSFFSDGSIFSFAPNACAFVQSATPPEDLAAIVEHYGPAE EEHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCHHEEECCCCCHHHHHHHHHHCCCCC DPAPHGVA CCCCCCCC >Mature Secondary Structure MKVLIVESEDGLARIWQKHLQRMGMHVCCAGGETDAIAHLSEHPTDIIILDLVLAEGCAL CEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCEEEEEHHHHCCCCE AVADYASYRLPDARVVFVTNTSFFSDGSIFSFAPNACAFVQSATPPEDLAAIVEHYGPAE EEHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCHHEEECCCCCHHHHHHHHHHCCCCC DPAPHGVA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA