| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is atpI [H]
Identifier: 110678643
GI number: 110678643
Start: 1273222
End: 1273554
Strand: Direct
Name: atpI [H]
Synonym: RD1_1321
Alternate gene names: 110678643
Gene position: 1273222-1273554 (Clockwise)
Preceding gene: 110678641
Following gene: 110678644
Centisome position: 30.81
GC content: 58.86
Gene sequence:
>333_bases GTGACAGATCCTGACCAACAGCAGCGCCTTGAGCAGCTAGAGGCCAAAATCGCCGCCGCGAAAAAGGCACAAGAGCCCGG CCCCCGATCGGATGAGCACTATTCCCAAGCGCAACTGGCGTGGCGGATGGTCATCGAACTCGTTGCCGGTCTTGGGATCG GGTTCGGTATTGGATACGGGCTGGATGTTCTGTTTGGGACGCTGCCGATATTCATGGTGCTATTTACAATGCTGGGTCTG GCGGCCGGGGTGAAGACGATGCTCCGCTCCGCGCAGGAAATCCAGGAAAAGAAGTTGGCCGAAGAGGCCGCAGATCGAGA CGAGGGAGCCTGA
Upstream 100 bases:
>100_bases AACAATATGTTGTGCCAGTTTTCCGCTTCTGTCAAAGCCGGTTGACTCACGCCACGCTGCACCGTAGCACAGGGCAACTC CCTGAAGGGGCAATTTGCGC
Downstream 100 bases:
>100_bases CATGGCGGACAAGGCAGAAGGCGGCGGGTTGGTTTTCAAACCGATGGAGCAGTTTGAGATCACTGCGCTGTTTGGGGGTG ATGTGACCTGGTACACGCCG
Product: ATP synthase F0, subunit I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTDPDQQQRLEQLEAKIAAAKKAQEPGPRSDEHYSQAQLAWRMVIELVAGLGIGFGIGYGLDVLFGTLPIFMVLFTMLGL AAGVKTMLRSAQEIQEKKLAEEAADRDEGA
Sequences:
>Translated_110_residues MTDPDQQQRLEQLEAKIAAAKKAQEPGPRSDEHYSQAQLAWRMVIELVAGLGIGFGIGYGLDVLFGTLPIFMVLFTMLGL AAGVKTMLRSAQEIQEKKLAEEAADRDEGA >Mature_109_residues TDPDQQQRLEQLEAKIAAAKKAQEPGPRSDEHYSQAQLAWRMVIELVAGLGIGFGIGYGLDVLFGTLPIFMVLFTMLGLA AGVKTMLRSAQEIQEKKLAEEAADRDEGA
Specific function: A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex [H]
COG id: COG5336
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial AtpI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016989 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11991; Mature: 11860
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPDQQQRLEQLEAKIAAAKKAQEPGPRSDEHYSQAQLAWRMVIELVAGLGIGFGIGYG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVLFGTLPIFMVLFTMLGLAAGVKTMLRSAQEIQEKKLAEEAADRDEGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDPDQQQRLEQLEAKIAAAKKAQEPGPRSDEHYSQAQLAWRMVIELVAGLGIGFGIGYG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVLFGTLPIFMVLFTMLGLAAGVKTMLRSAQEIQEKKLAEEAADRDEGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9818357 [H]