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The map label for this gene is 110678618

Identifier: 110678618

GI number: 110678618

Start: 1257612

End: 1258001

Strand: Direct

Name: 110678618

Synonym: RD1_1294

Alternate gene names: NA

Gene position: 1257612-1258001 (Clockwise)

Preceding gene: 110678613

Following gene: 110678622

Centisome position: 30.43

GC content: 58.72

Gene sequence:

>390_bases
ATGAAATCGCTGAACCCACCCGACATTGCGCCGCCGTTCGCGCGCTATTCACATGGCATAGAATTGCCCGCAGGCGCGCG
TCTTCTGCGCACCTCGGGGCAATTGGGTCAGGATGGGGATGGCGCTGTGCCGGAGGGGGCAGAGCCGCAAGCGGCCATCT
GTTTTGCGAATATCGCTGCGATTTTGAAAGAGACCGGGACGCAGGCCAATGATGTGTTCCACATCAGCGCATTTGTAACG
GATCGCGCGCATATGGCAGGGTATATGGCCGCGCGGGATCAGTTCCTGTCGCAAGTGTCTGTTTTGCCAACCTCCACGCT
GATGATCGTTTCCGGTTTTACCCGGCCCGAGTTTGTCGTCGAGGTTGAGGTCTGGGCCGCAAAGCTCTGA

Upstream 100 bases:

>100_bases
TGAGAGATTTGAAATCTGTGCCTGAATTACACTTGCGATGCTTTCAAACTTTTTTGTTTTGCGCAAGGATGAATACACCA
CAAAGGAAACAGAAGCCGCC

Downstream 100 bases:

>100_bases
CGCTCAGGTCGGTGGCATGCCGCCGTTGCGTACAGGCCTGTGTGCAACATGCCGATCTGGATTCGCGCAAGGCCAGCATG
AGAGGCCCCACGCCGAACCG

Product: L-PSP family endoribonuclease

Products: NA

Alternate protein names: Endoribonuclease; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Pyrimidine Utilization Protein C; Endoribonuclease L-PSP Family Protein; Threonine Degradation Protein; L-PSP Family Endoribonuclease

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKSLNPPDIAPPFARYSHGIELPAGARLLRTSGQLGQDGDGAVPEGAEPQAAICFANIAAILKETGTQANDVFHISAFVT
DRAHMAGYMAARDQFLSQVSVLPTSTLMIVSGFTRPEFVVEVEVWAAKL

Sequences:

>Translated_129_residues
MKSLNPPDIAPPFARYSHGIELPAGARLLRTSGQLGQDGDGAVPEGAEPQAAICFANIAAILKETGTQANDVFHISAFVT
DRAHMAGYMAARDQFLSQVSVLPTSTLMIVSGFTRPEFVVEVEVWAAKL
>Mature_129_residues
MKSLNPPDIAPPFARYSHGIELPAGARLLRTSGQLGQDGDGAVPEGAEPQAAICFANIAAILKETGTQANDVFHISAFVT
DRAHMAGYMAARDQFLSQVSVLPTSTLMIVSGFTRPEFVVEVEVWAAKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13742; Mature: 13742

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLNPPDIAPPFARYSHGIELPAGARLLRTSGQLGQDGDGAVPEGAEPQAAICFANIAA
CCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ILKETGTQANDVFHISAFVTDRAHMAGYMAARDQFLSQVSVLPTSTLMIVSGFTRPEFVV
HHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEE
EVEVWAAKL
EEEEEEECC
>Mature Secondary Structure
MKSLNPPDIAPPFARYSHGIELPAGARLLRTSGQLGQDGDGAVPEGAEPQAAICFANIAA
CCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ILKETGTQANDVFHISAFVTDRAHMAGYMAARDQFLSQVSVLPTSTLMIVSGFTRPEFVV
HHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEE
EVEVWAAKL
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA