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The map label for this gene is ccoQ

Identifier: 110678597

GI number: 110678597

Start: 1235066

End: 1235251

Strand: Direct

Name: ccoQ

Synonym: RD1_1272

Alternate gene names: NA

Gene position: 1235066-1235251 (Clockwise)

Preceding gene: 110678596

Following gene: 110678598

Centisome position: 29.88

GC content: 49.46

Gene sequence:

>186_bases
ATGGAAACCTATTCTTTCCTGCGTGAATTCGCCGATAGCTGGATGCTCTTGTTATTGTTTTGCATTTTCGTTGGCATCTG
GTTCTGGGTCGCACGACCCGGGTCCAACAAGCTGCATGACGAAGCCAAAACGATGATCTTCCGAAATGATGAACGACCCG
CCCCGCAAGAGGAGGCACAAAAATGA

Upstream 100 bases:

>100_bases
CTCCGAGGCCGATGCGCTGATCGCCTATTTACAAATGCTGGGCACGCTGGTCGATTTCTCGACCTTCACCCCAGATGCAA
GCCGCTAGGGAGGGGAAAAG

Downstream 100 bases:

>100_bases
CCAAAGTCCCCCCGAAACAAGAAGGTGATCCCAACACCACCGGCCACAGCTGGGACGGGATCGAGGAATTCGACAACCCG
ATGCCGCGGTGGTGGCTCTG

Product: cytochrome c oxidase, cbb3-type, subunit IV

Products: NA

Alternate protein names: Cytochrome C Oxidase Cbb3-Type Subunit IV; Cbb3-Type Cytochrome Oxidase Component

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
METYSFLREFADSWMLLLLFCIFVGIWFWVARPGSNKLHDEAKTMIFRNDERPAPQEEAQK

Sequences:

>Translated_61_residues
METYSFLREFADSWMLLLLFCIFVGIWFWVARPGSNKLHDEAKTMIFRNDERPAPQEEAQK
>Mature_61_residues
METYSFLREFADSWMLLLLFCIFVGIWFWVARPGSNKLHDEAKTMIFRNDERPAPQEEAQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7312; Mature: 7312

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYSFLREFADSWMLLLLFCIFVGIWFWVARPGSNKLHDEAKTMIFRNDERPAPQEEAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
K
C
>Mature Secondary Structure
METYSFLREFADSWMLLLLFCIFVGIWFWVARPGSNKLHDEAKTMIFRNDERPAPQEEAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA