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The map label for this gene is yejA [C]

Identifier: 110678588

GI number: 110678588

Start: 1223579

End: 1225510

Strand: Direct

Name: yejA [C]

Synonym: RD1_1263

Alternate gene names: 110678588

Gene position: 1223579-1225510 (Clockwise)

Preceding gene: 110678587

Following gene: 110678589

Centisome position: 29.6

GC content: 57.76

Gene sequence:

>1932_bases
ATGGCAGGATCGCAAGTTCGGATCGATAAGAACCAGCAAAACAAGGGTCTGGTTGGTCTTAGTCTTGGCATTCTGGTCTT
GGCAATCTGCTCCTTCTGGACAACTTCGGCGCGCGCGGCGGACAATATGATCGTCAGCCATGGCTATTCCTTTTACGGTG
ACTTGAGCTATCCTGCCGATTTCGCGCATTTTGATTATGTGAACCCTGATGCGCCCAAAGGTGGTGAAATCGCATTGAGC
GTGGTGGGGACATTCGATTCGATGCACCCCTACACGCGCAAGGGCCGCGCCGGTGCCCTGTCCAGCATCATGTATGAAAG
CCTGCTGGGTGATGGCACTGGCGGCGCAAGTGCCCCGGCGGACACCTATGGCGAATCCTACTGTTTGCTGTGCGAAAGGG
TCGAATACCCCGAGACCAAGGATTGGGTGATCTTTTACATGCGCCCTGAGGCGCGGTTCTCTGACGGAACCCCTGTAACG
GCGCATGACATTGCCTTCAGCCACAACCTGCTGCTGGATGAGGGCCTGAAATCCTATGCGGATGCGGTGCGCAAGCGTAT
TCCCAAGGTCGAAGTCATTGATGATCACACCATCAAATTCTATTTCACCGAAGGCATTTCGCGCCGCAGCCTGATTGATC
AGGTCGGCTTTGTGCCTGCGTGGTCCAAGAAATGGTACGAGGAAACCGGCGCTGGCCTTGATGAAAGCCGGCTCGAAGTG
TCGCCCGGTTCCGGGCCTTACATGATCGACAGTGTCGATGTGAACCGTCGCATCACCTACAAGCGCAACCCGGATTACTG
GGGTCAGGATTTGCCGTTCAACGTCGGACGCAACAACTTTGACGAGATTCGCATCGAGTACTTCGGCGATGACACGGCGG
CATTCGAGGCGTTCAAGGCGGGGGAATACACCTTCCGCAGCGAAGGTGATTCCAAGAAATGGGCAACCGGCTATGATTTT
CCCAAGACCCGCGACGGGCTGGTGGTCACCAAGGAACTGCCCAACGGATCACCGCCCACGCCCTCGGGTATCGTTTTCAA
CCTTGGCCGCGACACGCTGACGGACCGCCGGGTGCGTCAGGCTCTGGCGCTGGCCTTCAACTTTGAATGGACAAACGAAA
GCCTGCAATACGGATTGTTCCGGCAGCGCGCGTCTTTCACGCAGGGCACGCCTGTGATGGCCGTTGACCTGCCCGTTGAT
GCGGAACTTGCGTTCCTGCAAAGCCTTGGCGACCTCGTGCCGCCGGAAATGCTGAGCGAACCGGCTTTGGTGCCACATAC
TTCCAACGCTGAACGCCTGCTGGACCGACGCAATGCACGCAAGGCCATGCGACTGCTGGACGATGCAGGCTGGGTTGTCG
GGGACGACGGTATCCGCAGGAATGCGGATGACGAAACCCTATCGCTGAATTTCCTGTTCAACAGCGCCACTTCACCGACG
CTGAGCGCGGTAATGGAGAACTACGTTGCCAATGTGAAAACACTGGGCGTCGACATCACTTTTGAAAAGGTGGACGCCGC
GCAATACACGACGCGCGAGCGGGACCGCGATTATGACCTTGTCTTTGACGCCTATGCGGCATTTCTGGGCACCGGCACCG
GTTTGATGCAGCGCTACGGCTCAGAGGCGGCGGAATTTTCGCTGTTCAACCCGGCAGGGCTCGCCAGCCCTCTAGTGGAT
GCCATCATCGAACGGTCGCTGAACGCCACAACACGCGAAGAAGAGCAGGCATCCCTGACAGCGCTCGACCGGGCGCTGCG
CTATGAATTCATCATGATCCCCGTCTGGTATAACCCCAGCCACTGGGTCGCCTATTATGACCAGTATGAGCACCCGGCGG
AGATCCCGCCCTTTGCCCTCGGGCAATTGGATTTCTGGTGGTACAATCAGGATAAGGCGGATGCCTTGCGCGCCGCCGGA
GCGCTGAGGTAA

Upstream 100 bases:

>100_bases
AATCACATTTTCGCAACTTGTATCTTGGCCCGGCGTCCCGTTAGCTTACATCTGAGGGAAGAAGCCGGGGCACTCCGGCG
CGCAAAAGGAGGACGTCCAG

Downstream 100 bases:

>100_bases
CGCCGTGGGCGCCTATATTATCAGACGGTTGTTGCTGATCATTCCGACGCTGCTCGGGATCATGCTGATCAACTTCGCGC
TGGTGCAATTCGTGCCCGGC

Product: ABC transporter, periplasmic substrate-binding protein, putative

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MAGSQVRIDKNQQNKGLVGLSLGILVLAICSFWTTSARAADNMIVSHGYSFYGDLSYPADFAHFDYVNPDAPKGGEIALS
VVGTFDSMHPYTRKGRAGALSSIMYESLLGDGTGGASAPADTYGESYCLLCERVEYPETKDWVIFYMRPEARFSDGTPVT
AHDIAFSHNLLLDEGLKSYADAVRKRIPKVEVIDDHTIKFYFTEGISRRSLIDQVGFVPAWSKKWYEETGAGLDESRLEV
SPGSGPYMIDSVDVNRRITYKRNPDYWGQDLPFNVGRNNFDEIRIEYFGDDTAAFEAFKAGEYTFRSEGDSKKWATGYDF
PKTRDGLVVTKELPNGSPPTPSGIVFNLGRDTLTDRRVRQALALAFNFEWTNESLQYGLFRQRASFTQGTPVMAVDLPVD
AELAFLQSLGDLVPPEMLSEPALVPHTSNAERLLDRRNARKAMRLLDDAGWVVGDDGIRRNADDETLSLNFLFNSATSPT
LSAVMENYVANVKTLGVDITFEKVDAAQYTTRERDRDYDLVFDAYAAFLGTGTGLMQRYGSEAAEFSLFNPAGLASPLVD
AIIERSLNATTREEEQASLTALDRALRYEFIMIPVWYNPSHWVAYYDQYEHPAEIPPFALGQLDFWWYNQDKADALRAAG
ALR

Sequences:

>Translated_643_residues
MAGSQVRIDKNQQNKGLVGLSLGILVLAICSFWTTSARAADNMIVSHGYSFYGDLSYPADFAHFDYVNPDAPKGGEIALS
VVGTFDSMHPYTRKGRAGALSSIMYESLLGDGTGGASAPADTYGESYCLLCERVEYPETKDWVIFYMRPEARFSDGTPVT
AHDIAFSHNLLLDEGLKSYADAVRKRIPKVEVIDDHTIKFYFTEGISRRSLIDQVGFVPAWSKKWYEETGAGLDESRLEV
SPGSGPYMIDSVDVNRRITYKRNPDYWGQDLPFNVGRNNFDEIRIEYFGDDTAAFEAFKAGEYTFRSEGDSKKWATGYDF
PKTRDGLVVTKELPNGSPPTPSGIVFNLGRDTLTDRRVRQALALAFNFEWTNESLQYGLFRQRASFTQGTPVMAVDLPVD
AELAFLQSLGDLVPPEMLSEPALVPHTSNAERLLDRRNARKAMRLLDDAGWVVGDDGIRRNADDETLSLNFLFNSATSPT
LSAVMENYVANVKTLGVDITFEKVDAAQYTTRERDRDYDLVFDAYAAFLGTGTGLMQRYGSEAAEFSLFNPAGLASPLVD
AIIERSLNATTREEEQASLTALDRALRYEFIMIPVWYNPSHWVAYYDQYEHPAEIPPFALGQLDFWWYNQDKADALRAAG
ALR
>Mature_642_residues
AGSQVRIDKNQQNKGLVGLSLGILVLAICSFWTTSARAADNMIVSHGYSFYGDLSYPADFAHFDYVNPDAPKGGEIALSV
VGTFDSMHPYTRKGRAGALSSIMYESLLGDGTGGASAPADTYGESYCLLCERVEYPETKDWVIFYMRPEARFSDGTPVTA
HDIAFSHNLLLDEGLKSYADAVRKRIPKVEVIDDHTIKFYFTEGISRRSLIDQVGFVPAWSKKWYEETGAGLDESRLEVS
PGSGPYMIDSVDVNRRITYKRNPDYWGQDLPFNVGRNNFDEIRIEYFGDDTAAFEAFKAGEYTFRSEGDSKKWATGYDFP
KTRDGLVVTKELPNGSPPTPSGIVFNLGRDTLTDRRVRQALALAFNFEWTNESLQYGLFRQRASFTQGTPVMAVDLPVDA
ELAFLQSLGDLVPPEMLSEPALVPHTSNAERLLDRRNARKAMRLLDDAGWVVGDDGIRRNADDETLSLNFLFNSATSPTL
SAVMENYVANVKTLGVDITFEKVDAAQYTTRERDRDYDLVFDAYAAFLGTGTGLMQRYGSEAAEFSLFNPAGLASPLVDA
IIERSLNATTREEEQASLTALDRALRYEFIMIPVWYNPSHWVAYYDQYEHPAEIPPFALGQLDFWWYNQDKADALRAAGA
LR

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=618, Percent_Identity=33.0097087378641, Blast_Score=324, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 71844; Mature: 71713

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSQVRIDKNQQNKGLVGLSLGILVLAICSFWTTSARAADNMIVSHGYSFYGDLSYPAD
CCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCEEEECCCCEEECCCCCCC
FAHFDYVNPDAPKGGEIALSVVGTFDSMHPYTRKGRAGALSSIMYESLLGDGTGGASAPA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
DTYGESYCLLCERVEYPETKDWVIFYMRPEARFSDGTPVTAHDIAFSHNLLLDEGLKSYA
HHCCCCEEEEEHHCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHH
DAVRKRIPKVEVIDDHTIKFYFTEGISRRSLIDQVGFVPAWSKKWYEETGAGLDESRLEV
HHHHHHCCEEEEECCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE
SPGSGPYMIDSVDVNRRITYKRNPDYWGQDLPFNVGRNNFDEIRIEYFGDDTAAFEAFKA
CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHC
GEYTFRSEGDSKKWATGYDFPKTRDGLVVTKELPNGSPPTPSGIVFNLGRDTLTDRRVRQ
CCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHH
ALALAFNFEWTNESLQYGLFRQRASFTQGTPVMAVDLPVDAELAFLQSLGDLVPPEMLSE
HHHHHEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCC
PALVPHTSNAERLLDRRNARKAMRLLDDAGWVVGDDGIRRNADDETLSLNFLFNSATSPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCHH
LSAVMENYVANVKTLGVDITFEKVDAAQYTTRERDRDYDLVFDAYAAFLGTGTGLMQRYG
HHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHC
SEAAEFSLFNPAGLASPLVDAIIERSLNATTREEEQASLTALDRALRYEFIMIPVWYNPS
CCHHEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCC
HWVAYYDQYEHPAEIPPFALGQLDFWWYNQDKADALRAAGALR
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure 
AGSQVRIDKNQQNKGLVGLSLGILVLAICSFWTTSARAADNMIVSHGYSFYGDLSYPAD
CCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHCCEEEECCCCEEECCCCCCC
FAHFDYVNPDAPKGGEIALSVVGTFDSMHPYTRKGRAGALSSIMYESLLGDGTGGASAPA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
DTYGESYCLLCERVEYPETKDWVIFYMRPEARFSDGTPVTAHDIAFSHNLLLDEGLKSYA
HHCCCCEEEEEHHCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHH
DAVRKRIPKVEVIDDHTIKFYFTEGISRRSLIDQVGFVPAWSKKWYEETGAGLDESRLEV
HHHHHHCCEEEEECCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE
SPGSGPYMIDSVDVNRRITYKRNPDYWGQDLPFNVGRNNFDEIRIEYFGDDTAAFEAFKA
CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHC
GEYTFRSEGDSKKWATGYDFPKTRDGLVVTKELPNGSPPTPSGIVFNLGRDTLTDRRVRQ
CCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHH
ALALAFNFEWTNESLQYGLFRQRASFTQGTPVMAVDLPVDAELAFLQSLGDLVPPEMLSE
HHHHHEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCC
PALVPHTSNAERLLDRRNARKAMRLLDDAGWVVGDDGIRRNADDETLSLNFLFNSATSPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCHH
LSAVMENYVANVKTLGVDITFEKVDAAQYTTRERDRDYDLVFDAYAAFLGTGTGLMQRYG
HHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHC
SEAAEFSLFNPAGLASPLVDAIIERSLNATTREEEQASLTALDRALRYEFIMIPVWYNPS
CCHHEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCC
HWVAYYDQYEHPAEIPPFALGQLDFWWYNQDKADALRAAGALR
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA