| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is tesA [H]
Identifier: 110678555
GI number: 110678555
Start: 1195596
End: 1196234
Strand: Direct
Name: tesA [H]
Synonym: RD1_1228
Alternate gene names: 110678555
Gene position: 1195596-1196234 (Clockwise)
Preceding gene: 110678552
Following gene: 110678558
Centisome position: 28.93
GC content: 61.35
Gene sequence:
>639_bases ATGCGCAAGTTAATCGGATGTTTTGTCGTTTGTTTTCCAACGTGGGGCGCTGCGGATGGCGTTGTGATCGCGGCCCTCGG CGATAGCCTGACGCAGGGCTATGGGCTGGTGCAGGAGGAGGGCTTCGTGCCGCAACTGCAGGCCTGGCTGGACAGGGAAG GCATCGCGGCGCGGGTGATCAACGCAGGTGTCTCGGGCGACACAACGGCTGGCGGGCTGTCGCGGGTGGCCTGGACCCTT ACACCAAAGGTGGATGCGATGATCGTGGCCCTTGGCGGCAACGATCTTTTGCGCGGGATTGACCCGGCCGAAAGCCGCCG CAACATCACGGGAATTCTGGAGGCGGCAGCGGCGCAGAGCGTGGAGGTGTTGCTGGTGGGCATGCAGGCACCGGGTAACT TCGGCCCCGATTTCAAGGCGGAATTCGATGCGATTTATCCTGAGCTTGCGTCAGAATTCGGTGTTTTATACGCGGCAGAT TTTTTTGAAGGTTTGTCCGTCGTCGGGGGCGATCCAGCGAGCGTGCGGGCATTCATGCAACCGGATGGTATTCACCCCAA TGCACAGGGTGTCATGCGCATCGTTGAGGCGCTCGGGCCGGATGTGGCGGAACTGGTGGCACAAGCCGGATCGCGATAG
Upstream 100 bases:
>100_bases CATCCAGTGACAATGCTGCATCTGTGAGGGTGTAGATGGGGTCAGGCATGAGATACCACAGGTTGTTGGCTTCCCTCTGG CATATGGAGCTTGGATCAGA
Downstream 100 bases:
>100_bases GCCCCGCTACAAAAGAAAACGGGCGCCGGAAAGCGCCCGAATGACCCGCTAAAAGCCTGTTTTACGCAATTGCAAGATCG CTGGCGCTTTCGCGGCCATC
Product: putative acyl-CoA thioesterase
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRKLIGCFVVCFPTWGAADGVVIAALGDSLTQGYGLVQEEGFVPQLQAWLDREGIAARVINAGVSGDTTAGGLSRVAWTL TPKVDAMIVALGGNDLLRGIDPAESRRNITGILEAAAAQSVEVLLVGMQAPGNFGPDFKAEFDAIYPELASEFGVLYAAD FFEGLSVVGGDPASVRAFMQPDGIHPNAQGVMRIVEALGPDVAELVAQAGSR
Sequences:
>Translated_212_residues MRKLIGCFVVCFPTWGAADGVVIAALGDSLTQGYGLVQEEGFVPQLQAWLDREGIAARVINAGVSGDTTAGGLSRVAWTL TPKVDAMIVALGGNDLLRGIDPAESRRNITGILEAAAAQSVEVLLVGMQAPGNFGPDFKAEFDAIYPELASEFGVLYAAD FFEGLSVVGGDPASVRAFMQPDGIHPNAQGVMRIVEALGPDVAELVAQAGSR >Mature_212_residues MRKLIGCFVVCFPTWGAADGVVIAALGDSLTQGYGLVQEEGFVPQLQAWLDREGIAARVINAGVSGDTTAGGLSRVAWTL TPKVDAMIVALGGNDLLRGIDPAESRRNITGILEAAAAQSVEVLLVGMQAPGNFGPDFKAEFDAIYPELASEFGVLYAAD FFEGLSVVGGDPASVRAFMQPDGIHPNAQGVMRIVEALGPDVAELVAQAGSR
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=192, Percent_Identity=34.375, Blast_Score=99, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 22061; Mature: 22061
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLIGCFVVCFPTWGAADGVVIAALGDSLTQGYGLVQEEGFVPQLQAWLDREGIAARVI CCCHHEEEEEEECCCCCCCCEEEEECCCHHHHCCCCCCCCCCCHHHHHHHCCCCCEEHHE NAGVSGDTTAGGLSRVAWTLTPKVDAMIVALGGNDLLRGIDPAESRRNITGILEAAAAQS ECCCCCCCCCCCHHHEEEEECCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCC VEVLLVGMQAPGNFGPDFKAEFDAIYPELASEFGVLYAADFFEGLSVVGGDPASVRAFMQ EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCHHHCCCCHHHEEEEEC PDGIHPNAQGVMRIVEALGPDVAELVAQAGSR CCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure MRKLIGCFVVCFPTWGAADGVVIAALGDSLTQGYGLVQEEGFVPQLQAWLDREGIAARVI CCCHHEEEEEEECCCCCCCCEEEEECCCHHHHCCCCCCCCCCCHHHHHHHCCCCCEEHHE NAGVSGDTTAGGLSRVAWTLTPKVDAMIVALGGNDLLRGIDPAESRRNITGILEAAAAQS ECCCCCCCCCCCHHHEEEEECCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCC VEVLLVGMQAPGNFGPDFKAEFDAIYPELASEFGVLYAADFFEGLSVVGGDPASVRAFMQ EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCHHHCCCCHHHEEEEEC PDGIHPNAQGVMRIVEALGPDVAELVAQAGSR CCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]