Click here to switch to the map view.

The map label for this gene is 110678497

Identifier: 110678497

GI number: 110678497

Start: 1128427

End: 1128690

Strand: Direct

Name: 110678497

Synonym: RD1_1167

Alternate gene names: NA

Gene position: 1128427-1128690 (Clockwise)

Preceding gene: 110678496

Following gene: 110678500

Centisome position: 27.3

GC content: 64.02

Gene sequence:

>264_bases
TTGGGGCGCATGCGGACGCGGTTGGGCCGTTCCCTGAGCGGGCTCGGCATCACGCCGAAAAAGGCACGGGTCGCGACCGA
GCGGTTGTTCGTGGAGCGCCAATGGTCCGAGCGACAAGGGCACCGTGCAAAGGCAGGGCAACAGCGCGATGGCTTGATCG
AACACCGCGCGCGCCGGTTCGGAGCAATCAGAGCGTGTTGCCTTTTTTGCGTCTTGGGGCATCACTGCGCAATATCCGGC
CAGCCCGTGGATGAGGCAACATGA

Upstream 100 bases:

>100_bases
GCGTTCGATCCATCTCATTCCACTCTGATTATAGTGATTCACTGAGGTGGCCACATAACGATGCCGTCGCGAAGCGCTGC
GCTGACAGTTTTGACCGGTA

Downstream 100 bases:

>100_bases
CCGGCCAGCGGGGGTGTTCACAACGGGGGGAACGGTTTGCTCATGGATGCCCCTTTGGTTCCTAAAGCGTCATGCGAAAA
ACCTCGATCACGTAGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MGRMRTRLGRSLSGLGITPKKARVATERLFVERQWSERQGHRAKAGQQRDGLIEHRARRFGAIRACCLFCVLGHHCAISG
QPVDEAT

Sequences:

>Translated_87_residues
MGRMRTRLGRSLSGLGITPKKARVATERLFVERQWSERQGHRAKAGQQRDGLIEHRARRFGAIRACCLFCVLGHHCAISG
QPVDEAT
>Mature_86_residues
GRMRTRLGRSLSGLGITPKKARVATERLFVERQWSERQGHRAKAGQQRDGLIEHRARRFGAIRACCLFCVLGHHCAISGQ
PVDEAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9755; Mature: 9624

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMRTRLGRSLSGLGITPKKARVATERLFVERQWSERQGHRAKAGQQRDGLIEHRARRF
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
GAIRACCLFCVLGHHCAISGQPVDEAT
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GRMRTRLGRSLSGLGITPKKARVATERLFVERQWSERQGHRAKAGQQRDGLIEHRARRF
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
GAIRACCLFCVLGHHCAISGQPVDEAT
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA