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The map label for this gene is ybhR [C]

Identifier: 110678488

GI number: 110678488

Start: 1118220

End: 1119011

Strand: Reverse

Name: ybhR [C]

Synonym: RD1_1158

Alternate gene names: 110678488

Gene position: 1119011-1118220 (Counterclockwise)

Preceding gene: 110678489

Following gene: 110678486

Centisome position: 27.07

GC content: 56.69

Gene sequence:

>792_bases
ATGACCGGATTCTGGGGCGTGACGCGCGCCATTGTGGGGCGCGAATTTTTACGCTTCGTGCACCAGCGCGAACGCTTCTT
CGCGGCGCTTGTGCGGCCTCTGGTCTGGCTGCTGATCTTTGCTGCGGGTTTTCGCGCCGCCCTCGGTCTCTCTATCATAG
CCCCCTATCAGACGTATATCACCTATGAGACCTATATCGTGCCGGGTCTGTGTGCGATGGTGCTGCTTTTCAACGGCATG
CAAAGCTCGCTCAGTCTGGTCTATGATCGCGAAATGGGGTCCATGCGGCTCTTGCTGACCAGCCCGTTTCCACGCTGGTG
GCTGCTGTTTTGCAGGTTGTTTGGCGCCACGACAATTTCGGTGCTGCAAGTTTATGCGTTTTTGGCCATCGCAGCCCTCT
TTGGCATCACCATGCCCCCGCTTGGTTATGTCGCTGTTTTGCCCGGGCTGATCCTGGGCGGTCTGATGCTGGGCACTTTG
GGCCTCGTACTGTCGAGCTTTATCTCGCAGCTTGAGAATTTCGCAGGGGTGATGAACTTCGTCATTTTCCCGATGTTCTT
TTTGTCCACCGCGCTTTACCCGCTTTGGAAAATGGCGGAAAGCTCACCGCTGTTGCGTGACATCTGTGCTCTAAACCCGT
TCACCCATGTGGTTGAGCTCATTCGGTTCTCCCTCTACCTGCAGTTCAACCTCTCGGCCCTCGCATGGGTGCTGGCAAGC
ACGCTGGTTCTCGGGCTTATCGCGGCCTGGGGATATGATCCCTCGCGCGGTATGATGAAGCGCAAAGGATAG

Upstream 100 bases:

>100_bases
TGTTGCACAAAGGTAAAATCATCAATTCGGGCGCGACCGGCGAAATCCGCGGTGAAAGGCCGCTGTCGGACTGGTTTCTC
GCGCAAACAGGGGCTGCAGC

Downstream 100 bases:

>100_bases
GCCGATGTGCTCAAGTCTCGCGTTCAGCAAAAGAGACAGCACGGCAGCGCCAGCTTTTGATGTCCTGATTGGGATGGGAC
GCTGCCCATTTGGCAAGCTC

Product: ABC transporter, permease protein, putative

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Multidrug ABC Transporter Permease Protein; ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; Daunorubicin Resistance ABC Transporter Membrane Protein; Daunorubicin Resistance ABC Transporter Permease; ABC Transporter Permease; ABC-Type Drug Export System Membrane Protein; Antibiotic ABC Transporter Transmembrane Protein; Daunorubicin Resistance Membrane Protein; Drug ABC Transporter Membrane Protein; Daunorubicin Resistance Transmembrane Protein; ABC Efflux Pump Inner Membrane Subunit; Multidrug ABC Transporter Permease; ABC-2 Transporter Component; ABC Type Transporter Permease Component; Antibiotic Export Permease Protein; ABC Efflux Transporter Permease Protein; ABC-Type Multidrug Transport System; Daunorubicin Resistance ABC Transporter Permease Protein; Transporter ABC-2 Integral Membrane Protein Family; ABC-Type Multidrug Transport System Permease; ABC Transporter Protein

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTGFWGVTRAIVGREFLRFVHQRERFFAALVRPLVWLLIFAAGFRAALGLSIIAPYQTYITYETYIVPGLCAMVLLFNGM
QSSLSLVYDREMGSMRLLLTSPFPRWWLLFCRLFGATTISVLQVYAFLAIAALFGITMPPLGYVAVLPGLILGGLMLGTL
GLVLSSFISQLENFAGVMNFVIFPMFFLSTALYPLWKMAESSPLLRDICALNPFTHVVELIRFSLYLQFNLSALAWVLAS
TLVLGLIAAWGYDPSRGMMKRKG

Sequences:

>Translated_263_residues
MTGFWGVTRAIVGREFLRFVHQRERFFAALVRPLVWLLIFAAGFRAALGLSIIAPYQTYITYETYIVPGLCAMVLLFNGM
QSSLSLVYDREMGSMRLLLTSPFPRWWLLFCRLFGATTISVLQVYAFLAIAALFGITMPPLGYVAVLPGLILGGLMLGTL
GLVLSSFISQLENFAGVMNFVIFPMFFLSTALYPLWKMAESSPLLRDICALNPFTHVVELIRFSLYLQFNLSALAWVLAS
TLVLGLIAAWGYDPSRGMMKRKG
>Mature_262_residues
TGFWGVTRAIVGREFLRFVHQRERFFAALVRPLVWLLIFAAGFRAALGLSIIAPYQTYITYETYIVPGLCAMVLLFNGMQ
SSLSLVYDREMGSMRLLLTSPFPRWWLLFCRLFGATTISVLQVYAFLAIAALFGITMPPLGYVAVLPGLILGGLMLGTLG
LVLSSFISQLENFAGVMNFVIFPMFFLSTALYPLWKMAESSPLLRDICALNPFTHVVELIRFSLYLQFNLSALAWVLAST
LVLGLIAAWGYDPSRGMMKRKG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29413; Mature: 29282

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TGFWGVTRAIVGREFLRFVHQRERFFAALVRPLVWLLIFAAGFRAALGLSIIAPYQTYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TYETYIVPGLCAMVLLFNGMQSSLSLVYDREMGSMRLLLTSPFPRWWLLFCRLFGATTIS
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLQVYAFLAIAALFGITMPPLGYVAVLPGLILGGLMLGTLGLVLSSFISQLENFAGVMNF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFPMFFLSTALYPLWKMAESSPLLRDICALNPFTHVVELIRFSLYLQFNLSALAWVLAS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVLGLIAAWGYDPSRGMMKRKG
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA