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The map label for this gene is 110678439

Identifier: 110678439

GI number: 110678439

Start: 1055981

End: 1056529

Strand: Direct

Name: 110678439

Synonym: RD1_1103

Alternate gene names: NA

Gene position: 1055981-1056529 (Clockwise)

Preceding gene: 110678433

Following gene: 110678444

Centisome position: 25.55

GC content: 56.65

Gene sequence:

>549_bases
TTGTGCTACCAATTTTTGACAAAAGCAGGCATTGGGAGCGCGAGTTTTGCAAAGGATGACGAGATGAGCCGACTTGATTT
ATTCATTGCTCGCATGGTGTCACAACGGGCCTGCCTGAACCATGCCGCTCAGCTTACGGCGGATATCTCGGGGCCGGTTT
TCGAGCTTGGTCTGGGCAATGGGCGCACCTATCATCACATGTGCGAGATCATGCCAGAGCAAGACATCTATGTTTTTGAG
CGCGCGATTGCCTCTCATCCCGACAGCACGCCGCCGGACGATCGGGTTCTTTTGGGGGATGTCTTTGAAACGCTGCCGCT
GGCCCTGACGCGCTTTGGCGCAACGGCACGGCTTATTCATGCAGACCTTGGCGGGCACAACGCGCAGAAAAACGATGAAT
TTGCGCGCCGGGTGTCCCCGTTGATTGAACCCTTGCTGGCCGACGGGGGGCTGATGGTGTCAAGTGACCGGATGTATTTT
GAGACCTTGACGCAGATCGCGCTGCCGCAAGACGCCATCGAGGGGCGGTGTTTCATTTACCGGCGCTGA

Upstream 100 bases:

>100_bases
CCACTTCTTCTATCTCTTCCAGCATGGCGGCGACGGGGTTAACGGTATCAGTCAACGCGATTTCTTTCCTCAGGTCCAGC
GTTGAACGGAGAGTTGCGCT

Downstream 100 bases:

>100_bases
TATCGCGATCAGGGCGGTGTGTCAGACGGTTGTCGACAAAACCGCGTCGCGTATGGCCTTGATGTTCGCCCCGTAAGGCG
CGGGGTTGCTGACGGACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MCYQFLTKAGIGSASFAKDDEMSRLDLFIARMVSQRACLNHAAQLTADISGPVFELGLGNGRTYHHMCEIMPEQDIYVFE
RAIASHPDSTPPDDRVLLGDVFETLPLALTRFGATARLIHADLGGHNAQKNDEFARRVSPLIEPLLADGGLMVSSDRMYF
ETLTQIALPQDAIEGRCFIYRR

Sequences:

>Translated_182_residues
MCYQFLTKAGIGSASFAKDDEMSRLDLFIARMVSQRACLNHAAQLTADISGPVFELGLGNGRTYHHMCEIMPEQDIYVFE
RAIASHPDSTPPDDRVLLGDVFETLPLALTRFGATARLIHADLGGHNAQKNDEFARRVSPLIEPLLADGGLMVSSDRMYF
ETLTQIALPQDAIEGRCFIYRR
>Mature_182_residues
MCYQFLTKAGIGSASFAKDDEMSRLDLFIARMVSQRACLNHAAQLTADISGPVFELGLGNGRTYHHMCEIMPEQDIYVFE
RAIASHPDSTPPDDRVLLGDVFETLPLALTRFGATARLIHADLGGHNAQKNDEFARRVSPLIEPLLADGGLMVSSDRMYF
ETLTQIALPQDAIEGRCFIYRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20235; Mature: 20235

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYQFLTKAGIGSASFAKDDEMSRLDLFIARMVSQRACLNHAAQLTADISGPVFELGLGN
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GRTYHHMCEIMPEQDIYVFERAIASHPDSTPPDDRVLLGDVFETLPLALTRFGATARLIH
CCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEE
ADLGGHNAQKNDEFARRVSPLIEPLLADGGLMVSSDRMYFETLTQIALPQDAIEGRCFIY
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHCCEEEEE
RR
EC
>Mature Secondary Structure
MCYQFLTKAGIGSASFAKDDEMSRLDLFIARMVSQRACLNHAAQLTADISGPVFELGLGN
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GRTYHHMCEIMPEQDIYVFERAIASHPDSTPPDDRVLLGDVFETLPLALTRFGATARLIH
CCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEE
ADLGGHNAQKNDEFARRVSPLIEPLLADGGLMVSSDRMYFETLTQIALPQDAIEGRCFIY
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHCCEEEEE
RR
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA