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The map label for this gene is 110678434

Identifier: 110678434

GI number: 110678434

Start: 1049060

End: 1049737

Strand: Reverse

Name: 110678434

Synonym: RD1_1098

Alternate gene names: NA

Gene position: 1049737-1049060 (Counterclockwise)

Preceding gene: 110678435

Following gene: 110678431

Centisome position: 25.4

GC content: 51.62

Gene sequence:

>678_bases
TTGAAGCCATCTTCCGAATTTGAGACAAACTCAACAATGAAAAATCCGACCTCCAGAAGGGAATACGTTTTGAAAATTAC
AACACTTTTACTTACTGGTGCACTTGCTCTTACCACGTCGCTGGCTTCCGCAGCTACACTTTCGGACATGACTTTGACGC
CGAACAGCGGCAGTAACAGCACGACGTTTTTCGACGCTGACAATGATTTCAGCGAAACATTTGCATTCGGCAGCAATATC
GTTGCCGGGTCAGTTATCGACAGTTTTCGCCTGACGCTGGATGTGAGTGGGGCCACGAATGAATCTGGACTGTTCCTTGG
ATTTATCCCGGTTAAAGAAGACTGGAATATTCGTGTGCAGGGCTCAGCAAGCGGATCCGCGGATGATTACTTCGACGACA
TCACCGGTGATGGCCTAATTTCTTTCGTTATCGACGCGACCACGGACGGTGGCGGGGTGGATGCTTTTGCCACTTCCGTG
AATTCGGGTGTTTTCACATTTTGGCTGTCTGAAAATAGTGCGGATTCATTCGTGGCAAATCCATCAATCACGATAACTAG
CGCGCGCCTTGAAGTGCTCGGCACAGCGCCGACCCCGGTGCCGGTGCCGGCTTCTGCTTTGCTGTTGCTCGCGGGCGTCG
GTGGACTGGCCGCAATGCGCAAACGTAGCAGCACCTAG

Upstream 100 bases:

>100_bases
CACAAATCGCCTCGCTACCATCGAAACTTCAGAAAAACGAAGTGCAACCCCCGTATGAGTTGAATTTTAATTGTATTTTA
GGATTACTTAACACCGCATA

Downstream 100 bases:

>100_bases
ATAAATCAAGTCGTACGACGACCTTACTCGGGCGCTTTTGGAGCGCCCGTTTTTTTGATGGTTGCCATGCATTTGATCCT
GTCAAACGAATTCAAGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKPSSEFETNSTMKNPTSRREYVLKITTLLLTGALALTTSLASAATLSDMTLTPNSGSNSTTFFDADNDFSETFAFGSNI
VAGSVIDSFRLTLDVSGATNESGLFLGFIPVKEDWNIRVQGSASGSADDYFDDITGDGLISFVIDATTDGGGVDAFATSV
NSGVFTFWLSENSADSFVANPSITITSARLEVLGTAPTPVPVPASALLLLAGVGGLAAMRKRSST

Sequences:

>Translated_225_residues
MKPSSEFETNSTMKNPTSRREYVLKITTLLLTGALALTTSLASAATLSDMTLTPNSGSNSTTFFDADNDFSETFAFGSNI
VAGSVIDSFRLTLDVSGATNESGLFLGFIPVKEDWNIRVQGSASGSADDYFDDITGDGLISFVIDATTDGGGVDAFATSV
NSGVFTFWLSENSADSFVANPSITITSARLEVLGTAPTPVPVPASALLLLAGVGGLAAMRKRSST
>Mature_225_residues
MKPSSEFETNSTMKNPTSRREYVLKITTLLLTGALALTTSLASAATLSDMTLTPNSGSNSTTFFDADNDFSETFAFGSNI
VAGSVIDSFRLTLDVSGATNESGLFLGFIPVKEDWNIRVQGSASGSADDYFDDITGDGLISFVIDATTDGGGVDAFATSV
NSGVFTFWLSENSADSFVANPSITITSARLEVLGTAPTPVPVPASALLLLAGVGGLAAMRKRSST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23383; Mature: 23383

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSSEFETNSTMKNPTSRREYVLKITTLLLTGALALTTSLASAATLSDMTLTPNSGSNS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCCC
TTFFDADNDFSETFAFGSNIVAGSVIDSFRLTLDVSGATNESGLFLGFIPVKEDWNIRVQ
EEEEECCCCHHHHHHCCCCCEECCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEE
GSASGSADDYFDDITGDGLISFVIDATTDGGGVDAFATSVNSGVFTFWLSENSADSFVAN
ECCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCCCEEEC
PSITITSARLEVLGTAPTPVPVPASALLLLAGVGGLAAMRKRSST
CCEEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MKPSSEFETNSTMKNPTSRREYVLKITTLLLTGALALTTSLASAATLSDMTLTPNSGSNS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCCC
TTFFDADNDFSETFAFGSNIVAGSVIDSFRLTLDVSGATNESGLFLGFIPVKEDWNIRVQ
EEEEECCCCHHHHHHCCCCCEECCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEE
GSASGSADDYFDDITGDGLISFVIDATTDGGGVDAFATSVNSGVFTFWLSENSADSFVAN
ECCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEEEEEECCCCCCEEEC
PSITITSARLEVLGTAPTPVPVPASALLLLAGVGGLAAMRKRSST
CCEEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA