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The map label for this gene is yeaW [H]

Identifier: 110678374

GI number: 110678374

Start: 998478

End: 999623

Strand: Direct

Name: yeaW [H]

Synonym: RD1_1031

Alternate gene names: 110678374

Gene position: 998478-999623 (Clockwise)

Preceding gene: 110678373

Following gene: 110678375

Centisome position: 24.16

GC content: 58.81

Gene sequence:

>1146_bases
ATGCCCAAAGATCATGTAGACCCGATTGCCGCGCTGCGGGACAATACGTCCGTTCCTTTCGAGCGTGCACGCGCCATGCC
CACCGAAGTCTATACTTCGCAGGCCTTCGTGGATGCCGAGCTTGAGCATATCTTCCGCAAGGATTGGTACTGCGTCGGTC
GTGCGGATTCGCTGGTGGCCCCCGGTGACTACATATCCTGCGAGCTGGCGGGTCAGCCGATTGTGGTGTTGCGCGACCGT
GAGGAACAGTTGCGCGCGATGAGCAATGTGTGCCTGCACCGCATGTCCACCCTGCTGCACGGGCGCGGCAATGCCAAAAC
CATCGTTTGCCCCTATCATGCCTGGACGTACAACCTTGACGGCAAGCTGCGCGGTGCACCCGCGATGACCCAGAACGAAG
GGTTCTGCAAGGATCAGTACGAGCTGCCACAGGTGCGATGCGAGGAATGGCTGGGCTGGGTCTTTGTCTGCCTTGATCCC
GATGCCGCACCGGTCGCCGAACAATTGTCGGATGTCGCGCAGATGATCGCAGGCTATGACATGACGAATTATTCCGAAGC
GTTCTATGAGGAACATGTCTGGGACACGAACTGGAAGGTTCTGGCCGAGAACTTCATGGAAAGCTATCACCTGCCGGTGT
GCCACGCGGGCACCATCGGCGGTTTGTCGAGGCTGGAGGATATGATCTGCCCGCCCGGTGGTGCCGCGTTCAACTATCAC
ACGATCCTCAAGGATGAATCGCTGCGCATCGCCATGGCGCACCCCACCAGGAATGTCCGGCTGGAAGGGGACGCGCGGCG
CACGACCTATTTGCTGGCGCTTTACCCCAGCCTGATGATCACGCTGACGCCAGGTTATTTCTGGTACCTTTCCCTGCATC
CCAAAGGACCGGGGCAGGTGCACATCCGCTTTGGCGGCGGCATGTCCAATGACTTTGCCGATGACCCGGATACAGAAGAG
AACTTTGCCGCGCTCAAGACGCTTCTGGATGACGTGAATATCGAGGACCGCGGCTGCACCGAAAAGGTCTATCGTGGCCT
TTGTTCGGATGCAGCAACGCCCGGACACCTGAGCCATCTGGAACGACCCAACTATGATTTCGCGCAATATCTGATGGCAA
AGATTGACGCCGGGCGGGCCAGTTGA

Upstream 100 bases:

>100_bases
GGTTAAGCCAGAGTAAGCCAACGACCACTTCCCTTTGGGGGCGGGCGGCTGCATCATATCGCTCGAAAGTGAGTGCTGAT
GTGCCAAGGGAGCTGTGCCG

Downstream 100 bases:

>100_bases
CACGATGTATCTCCGCATTTCCGCGTCTGGCACGCGAACCACAGTCAAAGGGAACCAAATGATACGCACGGGAACCATGA
TATTGGCGGGTCTGGCGCTG

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPKDHVDPIAALRDNTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRADSLVAPGDYISCELAGQPIVVLRDR
EEQLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTQNEGFCKDQYELPQVRCEEWLGWVFVCLDP
DAAPVAEQLSDVAQMIAGYDMTNYSEAFYEEHVWDTNWKVLAENFMESYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYH
TILKDESLRIAMAHPTRNVRLEGDARRTTYLLALYPSLMITLTPGYFWYLSLHPKGPGQVHIRFGGGMSNDFADDPDTEE
NFAALKTLLDDVNIEDRGCTEKVYRGLCSDAATPGHLSHLERPNYDFAQYLMAKIDAGRAS

Sequences:

>Translated_381_residues
MPKDHVDPIAALRDNTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRADSLVAPGDYISCELAGQPIVVLRDR
EEQLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTQNEGFCKDQYELPQVRCEEWLGWVFVCLDP
DAAPVAEQLSDVAQMIAGYDMTNYSEAFYEEHVWDTNWKVLAENFMESYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYH
TILKDESLRIAMAHPTRNVRLEGDARRTTYLLALYPSLMITLTPGYFWYLSLHPKGPGQVHIRFGGGMSNDFADDPDTEE
NFAALKTLLDDVNIEDRGCTEKVYRGLCSDAATPGHLSHLERPNYDFAQYLMAKIDAGRAS
>Mature_380_residues
PKDHVDPIAALRDNTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRADSLVAPGDYISCELAGQPIVVLRDRE
EQLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTQNEGFCKDQYELPQVRCEEWLGWVFVCLDPD
AAPVAEQLSDVAQMIAGYDMTNYSEAFYEEHVWDTNWKVLAENFMESYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYHT
ILKDESLRIAMAHPTRNVRLEGDARRTTYLLALYPSLMITLTPGYFWYLSLHPKGPGQVHIRFGGGMSNDFADDPDTEEN
FAALKTLLDDVNIEDRGCTEKVYRGLCSDAATPGHLSHLERPNYDFAQYLMAKIDAGRAS

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=284, Percent_Identity=30.6338028169014, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI1788888, Length=218, Percent_Identity=28.8990825688073, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42855; Mature: 42724

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKDHVDPIAALRDNTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRADSLVA
CCCCCCCHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEC
PGDYISCELAGQPIVVLRDREEQLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLD
CCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECC
GKLRGAPAMTQNEGFCKDQYELPQVRCEEWLGWVFVCLDPDAAPVAEQLSDVAQMIAGYD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
MTNYSEAFYEEHVWDTNWKVLAENFMESYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYH
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCCEEEE
TILKDESLRIAMAHPTRNVRLEGDARRTTYLLALYPSLMITLTPGYFWYLSLHPKGPGQV
EEECCCCEEEEEECCCCCEEECCCCCHHEEEEEECCCEEEEECCCEEEEEEEECCCCCEE
HIRFGGGMSNDFADDPDTEENFAALKTLLDDVNIEDRGCTEKVYRGLCSDAATPGHLSHL
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHC
ERPNYDFAQYLMAKIDAGRAS
CCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PKDHVDPIAALRDNTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRADSLVA
CCCCCCHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEC
PGDYISCELAGQPIVVLRDREEQLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLD
CCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECC
GKLRGAPAMTQNEGFCKDQYELPQVRCEEWLGWVFVCLDPDAAPVAEQLSDVAQMIAGYD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
MTNYSEAFYEEHVWDTNWKVLAENFMESYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYH
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCCCEEEE
TILKDESLRIAMAHPTRNVRLEGDARRTTYLLALYPSLMITLTPGYFWYLSLHPKGPGQV
EEECCCCEEEEEECCCCCEEECCCCCHHEEEEEECCCEEEEECCCEEEEEEEECCCCCEE
HIRFGGGMSNDFADDPDTEENFAALKTLLDDVNIEDRGCTEKVYRGLCSDAATPGHLSHL
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHC
ERPNYDFAQYLMAKIDAGRAS
CCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]