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The map label for this gene is 110678352

Identifier: 110678352

GI number: 110678352

Start: 970370

End: 971116

Strand: Reverse

Name: 110678352

Synonym: RD1_1008

Alternate gene names: NA

Gene position: 971116-970370 (Counterclockwise)

Preceding gene: 110678360

Following gene: 110678350

Centisome position: 23.5

GC content: 53.28

Gene sequence:

>747_bases
GTGAATTTCATCAAGTTTTTCGAATTAGAGAAATTTTCCCTCGGCGATCTGCTTGATACGCTCGGTCTGGCTATGACCCG
CCCATGGAAATTAGCAGATGCGGTCTACCGTGGGGGCAACTCGGTACAAAATGCCCTTGTTTACTATTTTTTGCTCTTTT
CCGTATCGCTGATGGCGTTCCTTCCGTTCGGATTGAACGATGAGTTTCGCAATTTCGCGCAGCATTTCACGGTGACGGCT
TTCCTTATTCTCGCCGTGACATCCGTGACACTGTTTTGTGGGCTTCGTCTCGCCGGCGTAGACCTGCCATTTCATAAAGC
CCTGTCACTCAAGGCTTTCATCGCAGGTGCTTACGTGTTGGTCGTCAATGCGTTGGTCGCCTTGGCACTGGGCATCATGT
CGATCTTCATGCCTGAAGAAGTCCCGACCTTCAGCGCATTCGCCATGGGGTGTCTTCCGGTTCTGGACTTCGGCTCCGGC
ACCCCTCGGTTTACCGTGTCGCAGCCTACCCTCTCGATCTACCTATGCCTCACTCTGCTGAGCTTCTTGCTCAATCTCTT
TCTCTATGTTGGAATCTTCGCAGGACTCGCCCCGTTTCGCAAACGCAGCCGCCCGGCATTCATCATGATTGCCACAATGA
TCTACCTGATAGATTACACGATTTCGGCCGCCTATGCCGGGCGCAATCTCAACGTATCTTCCGAGTATTGCGCCAGCGCG
CGGGCCGCCGAAGGCATCGCAGGTTAG

Upstream 100 bases:

>100_bases
GACTGTGCATATGAGACCCCCTCACCAAGGCAACGCCCTACATTGAAGTTGCAAAACGTGATACGCTTTTGATCTCTGAC
ATGGTTTCAGGTCAAAAAAT

Downstream 100 bases:

>100_bases
CAAAGACGCCTGTGTTGGGTCAGTCTGCCAAGCCCTATTCCGGATCCGTGTTAAAGATCAGCCGCTCGTCACAAGGCGCC
ACGCGCAGGATGTTGGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNFIKFFELEKFSLGDLLDTLGLAMTRPWKLADAVYRGGNSVQNALVYYFLLFSVSLMAFLPFGLNDEFRNFAQHFTVTA
FLILAVTSVTLFCGLRLAGVDLPFHKALSLKAFIAGAYVLVVNALVALALGIMSIFMPEEVPTFSAFAMGCLPVLDFGSG
TPRFTVSQPTLSIYLCLTLLSFLLNLFLYVGIFAGLAPFRKRSRPAFIMIATMIYLIDYTISAAYAGRNLNVSSEYCASA
RAAEGIAG

Sequences:

>Translated_248_residues
MNFIKFFELEKFSLGDLLDTLGLAMTRPWKLADAVYRGGNSVQNALVYYFLLFSVSLMAFLPFGLNDEFRNFAQHFTVTA
FLILAVTSVTLFCGLRLAGVDLPFHKALSLKAFIAGAYVLVVNALVALALGIMSIFMPEEVPTFSAFAMGCLPVLDFGSG
TPRFTVSQPTLSIYLCLTLLSFLLNLFLYVGIFAGLAPFRKRSRPAFIMIATMIYLIDYTISAAYAGRNLNVSSEYCASA
RAAEGIAG
>Mature_248_residues
MNFIKFFELEKFSLGDLLDTLGLAMTRPWKLADAVYRGGNSVQNALVYYFLLFSVSLMAFLPFGLNDEFRNFAQHFTVTA
FLILAVTSVTLFCGLRLAGVDLPFHKALSLKAFIAGAYVLVVNALVALALGIMSIFMPEEVPTFSAFAMGCLPVLDFGSG
TPRFTVSQPTLSIYLCLTLLSFLLNLFLYVGIFAGLAPFRKRSRPAFIMIATMIYLIDYTISAAYAGRNLNVSSEYCASA
RAAEGIAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27141; Mature: 27141

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCC
>Mature Secondary Structure
MNFIKFFELEKFSLGDLLDTLGLAMTRPWKLADAVYRGGNSVQNALVYYFLLFSVSLMAF
CCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LPFGLNDEFRNFAQHFTVTAFLILAVTSVTLFCGLRLAGVDLPFHKALSLKAFIAGAYVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VVNALVALALGIMSIFMPEEVPTFSAFAMGCLPVLDFGSGTPRFTVSQPTLSIYLCLTLL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH
SFLLNLFLYVGIFAGLAPFRKRSRPAFIMIATMIYLIDYTISAAYAGRNLNVSSEYCASA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RAAEGIAG
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA