| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mst [H]
Identifier: 110678281
GI number: 110678281
Start: 902853
End: 903707
Strand: Direct
Name: mst [H]
Synonym: RD1_0934
Alternate gene names: 110678281
Gene position: 902853-903707 (Clockwise)
Preceding gene: 110678280
Following gene: 110678282
Centisome position: 21.84
GC content: 60.35
Gene sequence:
>855_bases ATGATTGATGATCCGAAAACACTCGTTTCGACCGAATGGCTGGCAGAGCATATGAAAGACCCTGACCTGCGTATTCTGGA TGCGTCCTGGTATCTGCCAGAGGCCGGGCGGCACGCCAAACAGGAATATGACGAAGGCCACATCCCCGGCGCGCGCTTCT TTGATATCGACGAAATATCGGACAGCCGTTCTGATCTGCCACATATGGCGCCGCGCAGCGAGAAATTCACCTCCCGGATG CGTGCGCTTGGTGTGGGTGATGGCCATCAGGTGGTTGTCTATGACGGGGCGGGCTTGCTCTCCGCGCCGCGGGTGTGGTG GCTTTTCCGCCTGATGGGGCAACAGAGTGTTGCTGTTCTGGACGGCGGTTTGCCGAAATGGAAAGCGGAAGGGCGCGAGA TCGAGGATATGCCGCCCATCGTGCGGGACCGCCACATCACTGTCCGTTTCCAGAACCATCTGGTGCGCGATGTCACGCAG GTGTCGGCTGCGTCCAAGATCAAGGATCACGTCATTGTCGATGCGCGCGCAGGCAACCGGTTTCGTGGCGAAGCACCTGA GCCGCGTGAAGGCTTGCGGGCGGGCCATATCCCCGGCTCTCGCTCTGTTCCATATTCCACGCTGTTGAATGAGGACCAGA CGATGAAGTCGCCTGACGACTGCAGACAGATATTCGAGGCGGCAGGGGTGGATCTGGATAAACCGATCATCACCTCCTGC GGGTCCGGGATCACGGCGGCGGTCCTCGCGCTGGCGCTGGAACGCATGGGACACCGCCATTGGTCCTTGTACGATGGGTC CTGGGCCGAATGGGGGATGTTTCCCACCGTGCCCGTCGCGACAGGAGACGCATGA
Upstream 100 bases:
>100_bases AAAGATCACGGCTGAACCATGCGCTGACTTGGGGTACGGGCTTGCCAGTCCAGCCCTGTGACGTTACCCAGAACCGGTCC TAGAGCGCAGGGGTAAGCTG
Downstream 100 bases:
>100_bases TGTTCGAGACCCTCAAGGCGCGCCCTGCCGACGGAATCCTCGCATTGATGCAGATGTTCAAAGACGATCCGCGCGACAAC AAGATCGACCTTGGCGTCGG
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MIDDPKTLVSTEWLAEHMKDPDLRILDASWYLPEAGRHAKQEYDEGHIPGARFFDIDEISDSRSDLPHMAPRSEKFTSRM RALGVGDGHQVVVYDGAGLLSAPRVWWLFRLMGQQSVAVLDGGLPKWKAEGREIEDMPPIVRDRHITVRFQNHLVRDVTQ VSAASKIKDHVIVDARAGNRFRGEAPEPREGLRAGHIPGSRSVPYSTLLNEDQTMKSPDDCRQIFEAAGVDLDKPIITSC GSGITAAVLALALERMGHRHWSLYDGSWAEWGMFPTVPVATGDA
Sequences:
>Translated_284_residues MIDDPKTLVSTEWLAEHMKDPDLRILDASWYLPEAGRHAKQEYDEGHIPGARFFDIDEISDSRSDLPHMAPRSEKFTSRM RALGVGDGHQVVVYDGAGLLSAPRVWWLFRLMGQQSVAVLDGGLPKWKAEGREIEDMPPIVRDRHITVRFQNHLVRDVTQ VSAASKIKDHVIVDARAGNRFRGEAPEPREGLRAGHIPGSRSVPYSTLLNEDQTMKSPDDCRQIFEAAGVDLDKPIITSC GSGITAAVLALALERMGHRHWSLYDGSWAEWGMFPTVPVATGDA >Mature_284_residues MIDDPKTLVSTEWLAEHMKDPDLRILDASWYLPEAGRHAKQEYDEGHIPGARFFDIDEISDSRSDLPHMAPRSEKFTSRM RALGVGDGHQVVVYDGAGLLSAPRVWWLFRLMGQQSVAVLDGGLPKWKAEGREIEDMPPIVRDRHITVRFQNHLVRDVTQ VSAASKIKDHVIVDARAGNRFRGEAPEPREGLRAGHIPGSRSVPYSTLLNEDQTMKSPDDCRQIFEAAGVDLDKPIITSC GSGITAAVLALALERMGHRHWSLYDGSWAEWGMFPTVPVATGDA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=274, Percent_Identity=41.2408759124088, Blast_Score=228, Evalue=4e-60, Organism=Homo sapiens, GI61835204, Length=274, Percent_Identity=41.2408759124088, Blast_Score=228, Evalue=4e-60, Organism=Homo sapiens, GI194473681, Length=274, Percent_Identity=41.2408759124088, Blast_Score=228, Evalue=4e-60, Organism=Homo sapiens, GI17402865, Length=273, Percent_Identity=40.6593406593407, Blast_Score=204, Evalue=6e-53, Organism=Escherichia coli, GI87082121, Length=273, Percent_Identity=45.0549450549451, Blast_Score=234, Evalue=6e-63, Organism=Escherichia coli, GI87081967, Length=289, Percent_Identity=28.719723183391, Blast_Score=96, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17561888, Length=290, Percent_Identity=27.2413793103448, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71997283, Length=305, Percent_Identity=26.5573770491803, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI115534702, Length=232, Percent_Identity=27.1551724137931, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17543836, Length=292, Percent_Identity=27.0547945205479, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17543838, Length=292, Percent_Identity=27.0547945205479, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17559150, Length=248, Percent_Identity=25, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324825, Length=265, Percent_Identity=33.5849056603774, Blast_Score=144, Evalue=1e-35,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31612; Mature: 31612
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDPKTLVSTEWLAEHMKDPDLRILDASWYLPEAGRHAKQEYDEGHIPGARFFDIDEIS CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEHHHHC DSRSDLPHMAPRSEKFTSRMRALGVGDGHQVVVYDGAGLLSAPRVWWLFRLMGQQSVAVL CCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEE DGGLPKWKAEGREIEDMPPIVRDRHITVRFQNHLVRDVTQVSAASKIKDHVIVDARAGNR CCCCCCCCCCCCCCCCCCCCHHCCEEEEEEHHHHHHHHHHHHHHHHHHCEEEEECCCCCC FRGEAPEPREGLRAGHIPGSRSVPYSTLLNEDQTMKSPDDCRQIFEAAGVDLDKPIITSC CCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHC GSGITAAVLALALERMGHRHWSLYDGSWAEWGMFPTVPVATGDA CCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIDDPKTLVSTEWLAEHMKDPDLRILDASWYLPEAGRHAKQEYDEGHIPGARFFDIDEIS CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEHHHHC DSRSDLPHMAPRSEKFTSRMRALGVGDGHQVVVYDGAGLLSAPRVWWLFRLMGQQSVAVL CCHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEE DGGLPKWKAEGREIEDMPPIVRDRHITVRFQNHLVRDVTQVSAASKIKDHVIVDARAGNR CCCCCCCCCCCCCCCCCCCCHHCCEEEEEEHHHHHHHHHHHHHHHHHHCEEEEECCCCCC FRGEAPEPREGLRAGHIPGSRSVPYSTLLNEDQTMKSPDDCRQIFEAAGVDLDKPIITSC CCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHC GSGITAAVLALALERMGHRHWSLYDGSWAEWGMFPTVPVATGDA CCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]