Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678249

Identifier: 110678249

GI number: 110678249

Start: 875312

End: 876289

Strand: Direct

Name: 110678249

Synonym: RD1_0902

Alternate gene names: NA

Gene position: 875312-876289 (Clockwise)

Preceding gene: 110678248

Following gene: 110678250

Centisome position: 21.18

GC content: 59.41

Gene sequence:

>978_bases
GTGCGGAATAGGTTTCGCCTGATCGGGGCGCTTGTCTGCGCCCTTTTCGGTTTTGCAGGGCAGGTTCTCGCCGAGGACCT
GCCCACTATACGTGCGGCGGTACTGAAAATCGGGACGGTCAATTGGGAGTTGGCGACTATCACCGACAACCAGCTCGACC
GTGAGAACGGCTTTGTGCTGGAGGTTCAGCCCTTTGCGGATAACGGGGCCACGCGTATCGCGGTTGAAGGCGGCGAAGCG
GATATGGCTGTCGCCGATTGGATATGGGTGGCGCGGCAGCGGGCAGCGGGCAAGGACTATGTCTTTATCCCCTATTCCAA
GGCCGTGGGCGGCCTGATTGTGACTGACACCAGCACCGCCGAAACATTGCAGGACCTGCAGGGCGGCAAGATCGGCATTG
CCGGGGGGCCGTTGGATAAATCATGGCTGATCCTGCAGGCCTATGCGCAACAGCAATATGGCTTTGATCTGAAGGCCGGC
ACAGAACAGGTTTTTGGCGCGCCGCCCCTGATTTTTAAATCCGCGCTTAATGATGACTACGCCGGGGCGATCAATTTCTG
GCACTTTCTGGCCAAGGGCAAATCGGCGGGCATGAGGGAACTGATCTCCGTTCAGGAGGCGGGAGCGGCATTGGGGTTGG
ATACCGACACGCCCCTGTTGGGATATTACGTCAAGGAAAGTTTCCTCGCAGAGAACCCCGATATTGCGCAGTCCTTCTTT
GAAGCGACGCGCGCGGCAAAGGATATGCTGGCCACGTCTGATGCCGCATGGGAGGCTGTGCGTCCCCGGATGAACGCCAG
CACGGATGCGGAATTCGAACAACTCAAGGCCGATTGGATCGCGGGCATTCCGGAACGCGGTCCGGTCGACGGGCAGGCTG
CCGAAAAGATGCTGGCGCTGATGAAAGAGCTTGGCGGTCCGGAGCTTGTCGGCCCGATGACCGCGATGCCACCCGGCCTG
TTTGCAGACGTTAAATAG

Upstream 100 bases:

>100_bases
GAAGTCGAAGACGATGGCTATGAGCTTGACGATGTGATCTGCAAGGGGGGTGATCAGTTCGACATTACGTTGGACAAGGA
CCTCAACGAAACCGGTCGCC

Downstream 100 bases:

>100_bases
CGCGGTGATGCACAGCGCGCGGCTCACTCCTTTTCTGTCACTGGCCGGGTTACTGGGCATGTGGGTGGTCGCTGCGATGC
TGACACAGGATGCGCAAATC

Product: ABC transporter, substrate-binding protein, putative

Products: NA

Alternate protein names: NMT1/THI5 Like Domain Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRNRFRLIGALVCALFGFAGQVLAEDLPTIRAAVLKIGTVNWELATITDNQLDRENGFVLEVQPFADNGATRIAVEGGEA
DMAVADWIWVARQRAAGKDYVFIPYSKAVGGLIVTDTSTAETLQDLQGGKIGIAGGPLDKSWLILQAYAQQQYGFDLKAG
TEQVFGAPPLIFKSALNDDYAGAINFWHFLAKGKSAGMRELISVQEAGAALGLDTDTPLLGYYVKESFLAENPDIAQSFF
EATRAAKDMLATSDAAWEAVRPRMNASTDAEFEQLKADWIAGIPERGPVDGQAAEKMLALMKELGGPELVGPMTAMPPGL
FADVK

Sequences:

>Translated_325_residues
MRNRFRLIGALVCALFGFAGQVLAEDLPTIRAAVLKIGTVNWELATITDNQLDRENGFVLEVQPFADNGATRIAVEGGEA
DMAVADWIWVARQRAAGKDYVFIPYSKAVGGLIVTDTSTAETLQDLQGGKIGIAGGPLDKSWLILQAYAQQQYGFDLKAG
TEQVFGAPPLIFKSALNDDYAGAINFWHFLAKGKSAGMRELISVQEAGAALGLDTDTPLLGYYVKESFLAENPDIAQSFF
EATRAAKDMLATSDAAWEAVRPRMNASTDAEFEQLKADWIAGIPERGPVDGQAAEKMLALMKELGGPELVGPMTAMPPGL
FADVK
>Mature_325_residues
MRNRFRLIGALVCALFGFAGQVLAEDLPTIRAAVLKIGTVNWELATITDNQLDRENGFVLEVQPFADNGATRIAVEGGEA
DMAVADWIWVARQRAAGKDYVFIPYSKAVGGLIVTDTSTAETLQDLQGGKIGIAGGPLDKSWLILQAYAQQQYGFDLKAG
TEQVFGAPPLIFKSALNDDYAGAINFWHFLAKGKSAGMRELISVQEAGAALGLDTDTPLLGYYVKESFLAENPDIAQSFF
EATRAAKDMLATSDAAWEAVRPRMNASTDAEFEQLKADWIAGIPERGPVDGQAAEKMLALMKELGGPELVGPMTAMPPGL
FADVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34938; Mature: 34938

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRFRLIGALVCALFGFAGQVLAEDLPTIRAAVLKIGTVNWELATITDNQLDRENGFVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
EVQPFADNGATRIAVEGGEADMAVADWIWVARQRAAGKDYVFIPYSKAVGGLIVTDTSTA
EEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEEECCCHH
ETLQDLQGGKIGIAGGPLDKSWLILQAYAQQQYGFDLKAGTEQVFGAPPLIFKSALNDDY
HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHCCCCH
AGAINFWHFLAKGKSAGMRELISVQEAGAALGLDTDTPLLGYYVKESFLAENPDIAQSFF
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
EATRAAKDMLATSDAAWEAVRPRMNASTDAEFEQLKADWIAGIPERGPVDGQAAEKMLAL
HHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
MKELGGPELVGPMTAMPPGLFADVK
HHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNRFRLIGALVCALFGFAGQVLAEDLPTIRAAVLKIGTVNWELATITDNQLDRENGFVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
EVQPFADNGATRIAVEGGEADMAVADWIWVARQRAAGKDYVFIPYSKAVGGLIVTDTSTA
EEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEEECCCHH
ETLQDLQGGKIGIAGGPLDKSWLILQAYAQQQYGFDLKAGTEQVFGAPPLIFKSALNDDY
HHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHCCCCH
AGAINFWHFLAKGKSAGMRELISVQEAGAALGLDTDTPLLGYYVKESFLAENPDIAQSFF
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
EATRAAKDMLATSDAAWEAVRPRMNASTDAEFEQLKADWIAGIPERGPVDGQAAEKMLAL
HHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
MKELGGPELVGPMTAMPPGLFADVK
HHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA