Click here to switch to the map view.

The map label for this gene is 110678232

Identifier: 110678232

GI number: 110678232

Start: 861352

End: 862395

Strand: Direct

Name: 110678232

Synonym: RD1_0885

Alternate gene names: NA

Gene position: 861352-862395 (Clockwise)

Preceding gene: 110678230

Following gene: 110678234

Centisome position: 20.84

GC content: 63.12

Gene sequence:

>1044_bases
ATGTTTGAAGCGATCATAACCCTGTGTTTGAGCCTGAGCGACGGGCCGTGTCGTGACCATCTGTTACCGGGTTATGAGGC
GCAAACGCAGGCGGCCTGTCAGGTGGCCCTGTCCGACAATCCGCCCGATCTACGCGTTTTCACGGGCTTGCAAGCGCAGG
GCATCGCAACCTGTCAGCCGATGGGCGAAACGCTGAGCATGACAGAGGTCGCGCCCGGCGTTTTTGTCCATGTCGGCCGC
ATAGAAGAGCCAAACGCATCGAACCGGGGTGACGTCAGCAACATGGGGTTCATCATCGGTGAAACGAGCGTCGCGGTCAT
TGATGCCGGCAGCGCGCGCTGGATCGGCGAGGCACTTTGGCGCGCCATTCGCACGCGCACAGACAAACCCGTGAGCCATG
CGATCGTCACGCATATGCATCCGGATCATGCTCTGGGTGTCGCGTTGTTTTCCGAGGCGGGCGCGGCAGTGGTCGGTCAC
ACCGGGTTGCCGCGCGCGCTGGCAGACCGGCAGGCCAACTATCTGGAGAGCCTGACGTCTCTGATTGGGGCGGAGGCGCT
GCTGGGCACGCGGGCACCCGAAGTCGACATCGCGGTAACAGATCAGTTGCAGATTGATCTGGGCGCGCGGCCCCTGACCA
TGCAGGCCTGGCCGGTGGCGCACACCGGGAATGACCTCACGGTCTGGGACACCGAGACGGGAACGTTTTTTGCCGGCGAT
CTGATATTCGACCGGCACTTGCCTGCTCTGGATGGCCGATTGACGGGGTGGCGTGCGGTGCTGCGCGCGTTGCAGGGCTT
GGATATTGAACGTGTCGTGCCGGGGCATGGTGCCGCCGCGCTGGACTGGCCTCTGGGGTCAGAGCCGATGGCGCGGTATC
TGTCGGTCTTGGAAAAGGACACCCGCGCCGCGGTCGAGGCGGGTACGCGGCTGGGCACGGCAGTTGAGGAAATAGCGCAG
AGCGAACGCAGCCTGTGGCAGCTTTTTGACGCCTATAATCCGCGCAATGCCACCGTGGCCTTCACGGAACTGGAATGGGA
ATGA

Upstream 100 bases:

>100_bases
TTTGCAGTTTATGGCACGAATCGCCCAAAAAAGACACATATACCTAAGGGGGCGTGGGTAACGGTGTCGTGTTTGGCTAC
ACCTGTGTCGGGAGGATGCC

Downstream 100 bases:

>100_bases
CCCGCTTTGTCTAACCCTGATCAACCACGGCAGCACTGAGCATCTGGCCGATTGAAAACAGACGCCGTTCCAGCAGGGTG
GGCGTCTCACACAGATAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein; Hydrolase; Zn-Dependent Hydrolase; Beta-Lactamase; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily; Secreted Hydrolase; Beta Lactamase SoxH-Like Protein; SoxH Protein -Like Protein; Glyoxylase-Like Zinc-Dependent Hydrolase; Zn-Dependent Hydrolase Or Glyoxylase; SoxH Protein-Like; Zn-Dependent Hydrolase Family Protein; Beta-Lactamase Class B; Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MFEAIITLCLSLSDGPCRDHLLPGYEAQTQAACQVALSDNPPDLRVFTGLQAQGIATCQPMGETLSMTEVAPGVFVHVGR
IEEPNASNRGDVSNMGFIIGETSVAVIDAGSARWIGEALWRAIRTRTDKPVSHAIVTHMHPDHALGVALFSEAGAAVVGH
TGLPRALADRQANYLESLTSLIGAEALLGTRAPEVDIAVTDQLQIDLGARPLTMQAWPVAHTGNDLTVWDTETGTFFAGD
LIFDRHLPALDGRLTGWRAVLRALQGLDIERVVPGHGAAALDWPLGSEPMARYLSVLEKDTRAAVEAGTRLGTAVEEIAQ
SERSLWQLFDAYNPRNATVAFTELEWE

Sequences:

>Translated_347_residues
MFEAIITLCLSLSDGPCRDHLLPGYEAQTQAACQVALSDNPPDLRVFTGLQAQGIATCQPMGETLSMTEVAPGVFVHVGR
IEEPNASNRGDVSNMGFIIGETSVAVIDAGSARWIGEALWRAIRTRTDKPVSHAIVTHMHPDHALGVALFSEAGAAVVGH
TGLPRALADRQANYLESLTSLIGAEALLGTRAPEVDIAVTDQLQIDLGARPLTMQAWPVAHTGNDLTVWDTETGTFFAGD
LIFDRHLPALDGRLTGWRAVLRALQGLDIERVVPGHGAAALDWPLGSEPMARYLSVLEKDTRAAVEAGTRLGTAVEEIAQ
SERSLWQLFDAYNPRNATVAFTELEWE
>Mature_347_residues
MFEAIITLCLSLSDGPCRDHLLPGYEAQTQAACQVALSDNPPDLRVFTGLQAQGIATCQPMGETLSMTEVAPGVFVHVGR
IEEPNASNRGDVSNMGFIIGETSVAVIDAGSARWIGEALWRAIRTRTDKPVSHAIVTHMHPDHALGVALFSEAGAAVVGH
TGLPRALADRQANYLESLTSLIGAEALLGTRAPEVDIAVTDQLQIDLGARPLTMQAWPVAHTGNDLTVWDTETGTFFAGD
LIFDRHLPALDGRLTGWRAVLRALQGLDIERVVPGHGAAALDWPLGSEPMARYLSVLEKDTRAAVEAGTRLGTAVEEIAQ
SERSLWQLFDAYNPRNATVAFTELEWE

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37333; Mature: 37333

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEAIITLCLSLSDGPCRDHLLPGYEAQTQAACQVALSDNPPDLRVFTGLQAQGIATCQP
CHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHEEEEEECCCCCCEEEEECCCCCCCEECCC
MGETLSMTEVAPGVFVHVGRIEEPNASNRGDVSNMGFIIGETSVAVIDAGSARWIGEALW
CCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHH
RAIRTRTDKPVSHAIVTHMHPDHALGVALFSEAGAAVVGHTGLPRALADRQANYLESLTS
HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
LIGAEALLGTRAPEVDIAVTDQLQIDLGARPLTMQAWPVAHTGNDLTVWDTETGTFFAGD
HHHHHHHHCCCCCCEEEEEECEEEEECCCCCEEEEECCEEECCCEEEEEECCCCCEEECC
LIFDRHLPALDGRLTGWRAVLRALQGLDIERVVPGHGAAALDWPLGSEPMARYLSVLEKD
EEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHH
TRAAVEAGTRLGTAVEEIAQSERSLWQLFDAYNPRNATVAFTELEWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MFEAIITLCLSLSDGPCRDHLLPGYEAQTQAACQVALSDNPPDLRVFTGLQAQGIATCQP
CHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHEEEEEECCCCCCEEEEECCCCCCCEECCC
MGETLSMTEVAPGVFVHVGRIEEPNASNRGDVSNMGFIIGETSVAVIDAGSARWIGEALW
CCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHH
RAIRTRTDKPVSHAIVTHMHPDHALGVALFSEAGAAVVGHTGLPRALADRQANYLESLTS
HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
LIGAEALLGTRAPEVDIAVTDQLQIDLGARPLTMQAWPVAHTGNDLTVWDTETGTFFAGD
HHHHHHHHCCCCCCEEEEEECEEEEECCCCCEEEEECCEEECCCEEEEEECCCCCEEECC
LIFDRHLPALDGRLTGWRAVLRALQGLDIERVVPGHGAAALDWPLGSEPMARYLSVLEKD
EEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHH
TRAAVEAGTRLGTAVEEIAQSERSLWQLFDAYNPRNATVAFTELEWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA