| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is hyuE [H]
Identifier: 110678210
GI number: 110678210
Start: 836023
End: 836706
Strand: Direct
Name: hyuE [H]
Synonym: RD1_0861
Alternate gene names: 110678210
Gene position: 836023-836706 (Clockwise)
Preceding gene: 110678209
Following gene: 110678212
Centisome position: 20.23
GC content: 55.12
Gene sequence:
>684_bases ATGAAAATCCTGATGATCAACCCGAACACAACCAGTTCCATGACGGATAAAATCGCGATTGCGGCAAGGTCAGTCGCGCG CCCTGACACGGACATCATCGCCACGAATTCCCAGGATGGACCAGCCAGCATTCAGGGTTTTCTCGATGTGGCCAATTGCA TCCCCGGCCTGCTGGCCGAGGTGGCGCTGCATAAGGACGTTGATGCCATCGTTGTCGCCTGTTTTGACGACACCGGGGTT GATGCCGTGCGCACGCTGGTTGACGTGCCGGTCCTCGGCATCGGCGAGGCTGCCTATCATGCCGCCAGTATGATCGCCAA CAAGTTCAGCGTCATAACAACACTCTCGCGTTCCGTGCCGGGACTGGAAAATAATCTGATGCGCTACGGGTTGGCGCAAA AATGCGCACGCGTTCGCGCGACAGATATTCCCGTTTTGAAGCTCGAAGAGGGGGATCCGGCGACATTGTTCAAGATAAAG TCCGAAATTCGCGAAGCGATAGCAGCAGATAATGCCGAGGCAATCGTCTTGGGATGTGCTGGCATGGCGGACCTTATGGC GCAGCTCAGTGATGAATTTGGGCTTCCGGTTATTGATGGTGTTGCAGCAGGTGTCACCTTTGCCGAAGCGCTTGTGAACA ACAAATTGCGCACGTCCAAAATCGGAGCCTACTCGGGCCAATAA
Upstream 100 bases:
>100_bases GATGGCCACCGGCAACGTAGTCATCGAAGGCAATTCCAAAGATTTGCTGCATGATGACCGGATCAAGGCTGCCTACCTCG GCGGTGAGGTGTAAACTGAC
Downstream 100 bases:
>100_bases CCTTTCGGCCCCTATGTGTGCCGCGTCCCGTTTGCAAAAGATGCGCGGCTCAATCCAAGGTGACCGACTGGACCGTTCGT AGTTGGGAGCATCACGCACT
Product: hydantoin racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAEVALHKDVDAIVVACFDDTGV DAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIK SEIREAIAADNAEAIVLGCAGMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ
Sequences:
>Translated_227_residues MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAEVALHKDVDAIVVACFDDTGV DAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIK SEIREAIAADNAEAIVLGCAGMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ >Mature_227_residues MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAEVALHKDVDAIVVACFDDTGV DAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIK SEIREAIAADNAEAIVLGCAGMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322221, Length=229, Percent_Identity=24.8908296943231, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 23759; Mature: 23759
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAE CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH VALHKDVDAIVVACFDDTGVDAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVP HHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIKSEIREAIAADNAEAIVLGCA CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC GMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC >Mature Secondary Structure MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAE CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH VALHKDVDAIVVACFDDTGVDAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVP HHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIKSEIREAIAADNAEAIVLGCA CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC GMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]