Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is buk [H]

Identifier: 110678193

GI number: 110678193

Start: 819667

End: 820767

Strand: Direct

Name: buk [H]

Synonym: RD1_0841

Alternate gene names: 110678193

Gene position: 819667-820767 (Clockwise)

Preceding gene: 110678192

Following gene: 110678194

Centisome position: 19.83

GC content: 58.76

Gene sequence:

>1101_bases
GTGGCCCGGAACTTAATTCTCGCCATCAACCCCGGCACCACCACGACGCGATGCGCGCTATATGCGGTGTCATCGTCACA
GATCCGTCCGGTGGCAGAACAGAACCTTGACCATGACGAAGCGATGATGGCGCAGTTCGCGAATATCGCGTCACAACTGG
AATATCGGGCGACATGCGTGGGGGATTTCATCGCAAGCGAGATGCAAGAGGGCGACCAGTTGGTTGCAGCCGCGGGACGT
GGGGGCATGCTGACACCGGTGCCTGCGGGTGTGATTGCGGTCAATCAGGCCTTGGTTGATTTTGCCTTGCACACGCCCGT
TTATCACCATGCGAGCAATCTTGGCGCGCCGCTGGCTCATGCCATCGCGCAGACGCATGATGTACCCGCGTTCATCGTGG
ACCCGGTGAGCGTCGATGAACTGCCGCCCGTGGCACGCGTGACCGGGGATCCTGATTTGCCGCGCTTCAGCTTTGTGCAT
GCGCTGAATATCCGCGCCTGTGGCCGGCGGCTGGCAGCCGACATCGGCAAGGAGTTCAAAGACGTTCGCGCGGTTATTGC
GCATCTGGGTGCGGGGTTTTCAATCGCGACGCTCATGGGTGGTAAATTGGTCGACAGTTCCAACCGGATGGAGATTTCAC
CATTTACGCCGGAACGGGCCGGGGGGCTGCCGCCTTTGCCGTTGATCGAACTTTGCTACTCGCAGCGCTACAGCAAGGCA
GAGCTTCTTTCGCGTCTGTACGGAAAAGGCGGTGTCTTTGCCCATTTGGGGACCAAAGACATCCGCAAGGTCGAAGCCAT
GGTAAAGGCAGGCGATGAGAAAGCAGCACTTGTCTATCATGCGATGCTCTACCAGATTGCAAAGGCAATTGGCGCGATGG
CATCCGTGGCAGATTTCGATCTTGATGCGATCATTCTGACGGGGGGGCTGTCCAACAGTGATGATGTCGTCGACTATCTG
CGCCGCAAGTTGCACCGTATTGCCGACATCGTTGTTTATCCCGGCAGCAACGAATGTCTGGCGCTGGCCGAAGGTGCCGC
CCGCGTGCTGAACAAAACCGAAGAGCCGATGACATGGCCCGTGCGCGCGGTGGCCACATGA

Upstream 100 bases:

>100_bases
GACGCAAAGGCTCGTCCTATGGATCACGTGAGCAGGGCCGCTACGCCGCTGAATTCTACACGTCGGTCAAAACCGCCTAT
TCTTTTGCAGGGTAACAGAC

Downstream 100 bases:

>100_bases
GCGAGATACGCAGTTTTGCCGACCTGCGCGCGGCGGTGGTCGATCAAGGCGCCCATCGGCTGAGCGTTGCGGGCGGTGAT
GATCCGGAAGTGATGAAGGC

Product: butyrate kinase

Products: NA

Alternate protein names: BK 1; Branched-chain carboxylic acid kinase 1 [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCVGDFIASEMQEGDQLVAAAGR
GGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAHAIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVH
ALNIRACGRRLAADIGKEFKDVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA
ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFDLDAIILTGGLSNSDDVVDYL
RRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWPVRAVAT

Sequences:

>Translated_366_residues
MARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCVGDFIASEMQEGDQLVAAAGR
GGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAHAIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVH
ALNIRACGRRLAADIGKEFKDVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA
ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFDLDAIILTGGLSNSDDVVDYL
RRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWPVRAVAT
>Mature_365_residues
ARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCVGDFIASEMQEGDQLVAAAGRG
GMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAHAIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVHA
LNIRACGRRLAADIGKEFKDVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKAE
LLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFDLDAIILTGGLSNSDDVVDYLR
RKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWPVRAVAT

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG3426

COG function: function code C; Butyrate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetokinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000890
- InterPro:   IPR011245 [H]

Pfam domain/function: PF00871 Acetate_kinase [H]

EC number: =2.7.2.7 [H]

Molecular weight: Translated: 39120; Mature: 38989

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS01076 ACETATE_KINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCV
CCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GDFIASEMQEGDQLVAAAGRGGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAH
HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH
AIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVHALNIRACGRRLAADIGKEFK
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA
HHHHHHHHHCCCCHHHHHHCCEEECCCCCEEECCCCCHHCCCCCCHHHHHHHHHCCCCHH
ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFD
HHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDAIILTGGLSNSDDVVDYLRRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWP
CCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHCCCCCCCCCC
VRAVAT
CCEECC
>Mature Secondary Structure 
ARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCV
CCCEEEEECCCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GDFIASEMQEGDQLVAAAGRGGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAH
HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH
AIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVHALNIRACGRRLAADIGKEFK
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA
HHHHHHHHHCCCCHHHHHHCCEEECCCCCEEECCCCCHHCCCCCCHHHHHHHHHCCCCHH
ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFD
HHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDAIILTGGLSNSDDVVDYLRRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWP
CCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHCCCCCCCCCC
VRAVAT
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]