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The map label for this gene is mocR [H]

Identifier: 110678187

GI number: 110678187

Start: 813597

End: 815060

Strand: Direct

Name: mocR [H]

Synonym: RD1_0834

Alternate gene names: 110678187

Gene position: 813597-815060 (Clockwise)

Preceding gene: 110678176

Following gene: 110678188

Centisome position: 19.68

GC content: 57.38

Gene sequence:

>1464_bases
ATGGCTAAACCGAGGATCGCAGCTGAGGTTTTCTTTTTGGACCGCGCTTCAAAAAGGCCTCTGCAGACCCAGATAAGAGA
GGCCGTCGTCGCCTCGATCCTGTCGAAACGGGCAATGCCGGGGTCATTGATGCCGTCATCGCGCAAACTTGCACATCACC
TTGGCGTTGCGCGCATGACCGTCACACTGGCTTTTCAGGAACTGGTCGATCAGGGATATCTGGAGGCCCGCAGCCGCAGC
GGGTATTCGGTCGCCGATACCGATGCGATACCGCGTCTGCCGGTTGGTGATGCAACGGCGCATATCGAAAACAGTACACT
TTGGCAGAAAGTCCTGTCTGAAAACCTGCGAACGCGCCGCCGGGTGATCAAGCCGAAGGATTGGCGGAACATGCCTTACC
CTTTTGTCTTCGGAGAAATGGATGGCAAGATTTTCAGACATACGGCGTGGCGCGAATGCGTCAGGCAGGCCATAGGAACG
CGCGATTTTGATCTGATGGCCAGCAATGAGGCGACGGACGACCCTTTGCTGGTCGACTACATCCTGTCCAGGATGCTGCC
CCGGCGGGGAATAACCGCAAAAAAAGAGCAGGTTCTGATCACCGTTGGCGCTCAGAATGCCATCTGGCTGGCGATAGAAC
TGTTGACCCGTGCCCCCCTGAAAGCGGTTTGCGAAGACCCCTGTTATCCGGACACACGGCAGGCTCTGAGTTGGTGCGGA
GCCGACGTTACCACCGTCGAAGTGGATCAGGAGGGCCTGCCACCGGACAATATACCGATGGGCGTCCAAGCGGTCTTTGT
GACACCCAGTCACCATGCGCCCACAGGTGCAACCATGCCCTTGGCGCGGCGTGAACGGCTGCTTGAATTGGCTCAAGCCC
GCGATTTCATAATCGTGGAGGATGATTACGAGTTCGAGATGAGCTTTATCGAACCGCCCAGCCCTGCGCTCAAAGCCATA
GATAAGAACCAGCGCGTTCTTTATGCGGGCAGTTTTTCCAAAGCCCTGTTTCCGGGTCTTCGGTTGGGGTATCTTGTGGG
GCCTGAACAGGTGATCGCCGAGGCGCGCGAGCTGCGCTCGATGATGCTGCGGCATCCGCCCGGACATCTTCAACGCACAG
CCGCCTACTTCCTTGCACAAGGCTACTACGACTTGCTGATCCGCGACATGCGACGGGAGTTTGCCAAACGCCGCAAAGCG
GTTGTCGAAGCCCTGGCCAGGACAGACCTCGAAGTGGCGGGCTCCGCGCAGTTTGGCGGGACAAGCCTCTGGGTCAAAGC
GCCTGACGGCACCGATACCCAAACGCTTGCTCAAGATTTGCTGGCAGACGGTGTTGTGATAGAGCCCGGCGCGCCGTTTT
TTCAGGGTGACAACCAACCGTCCGAGTATTTCAGACTTGGCTATTCCTCGATTCCGCTTGAGAAAATCGCGAAAGGTGTT
CAGTTGATTGCGCAGCGGGTATAA

Upstream 100 bases:

>100_bases
ATCCACCCCCAAGCTGACGGCTCACTAGAAGGATTCGTTAACCTTGCGTTAGGGCCAGTATTTCTATTGACTTAGACCAG
TTTGGTAAGCACTTTGAATC

Downstream 100 bases:

>100_bases
TGCGCCCTGCTTTTCGGCGGGCAACCTGCCTGCACACGCATCACAAGGATGAGAAGATTTGGAACTGACGCAGCCGCTCT
CATCGCTTTTGGTTGCCAAT

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MAKPRIAAEVFFLDRASKRPLQTQIREAVVASILSKRAMPGSLMPSSRKLAHHLGVARMTVTLAFQELVDQGYLEARSRS
GYSVADTDAIPRLPVGDATAHIENSTLWQKVLSENLRTRRRVIKPKDWRNMPYPFVFGEMDGKIFRHTAWRECVRQAIGT
RDFDLMASNEATDDPLLVDYILSRMLPRRGITAKKEQVLITVGAQNAIWLAIELLTRAPLKAVCEDPCYPDTRQALSWCG
ADVTTVEVDQEGLPPDNIPMGVQAVFVTPSHHAPTGATMPLARRERLLELAQARDFIIVEDDYEFEMSFIEPPSPALKAI
DKNQRVLYAGSFSKALFPGLRLGYLVGPEQVIAEARELRSMMLRHPPGHLQRTAAYFLAQGYYDLLIRDMRREFAKRRKA
VVEALARTDLEVAGSAQFGGTSLWVKAPDGTDTQTLAQDLLADGVVIEPGAPFFQGDNQPSEYFRLGYSSIPLEKIAKGV
QLIAQRV

Sequences:

>Translated_487_residues
MAKPRIAAEVFFLDRASKRPLQTQIREAVVASILSKRAMPGSLMPSSRKLAHHLGVARMTVTLAFQELVDQGYLEARSRS
GYSVADTDAIPRLPVGDATAHIENSTLWQKVLSENLRTRRRVIKPKDWRNMPYPFVFGEMDGKIFRHTAWRECVRQAIGT
RDFDLMASNEATDDPLLVDYILSRMLPRRGITAKKEQVLITVGAQNAIWLAIELLTRAPLKAVCEDPCYPDTRQALSWCG
ADVTTVEVDQEGLPPDNIPMGVQAVFVTPSHHAPTGATMPLARRERLLELAQARDFIIVEDDYEFEMSFIEPPSPALKAI
DKNQRVLYAGSFSKALFPGLRLGYLVGPEQVIAEARELRSMMLRHPPGHLQRTAAYFLAQGYYDLLIRDMRREFAKRRKA
VVEALARTDLEVAGSAQFGGTSLWVKAPDGTDTQTLAQDLLADGVVIEPGAPFFQGDNQPSEYFRLGYSSIPLEKIAKGV
QLIAQRV
>Mature_486_residues
AKPRIAAEVFFLDRASKRPLQTQIREAVVASILSKRAMPGSLMPSSRKLAHHLGVARMTVTLAFQELVDQGYLEARSRSG
YSVADTDAIPRLPVGDATAHIENSTLWQKVLSENLRTRRRVIKPKDWRNMPYPFVFGEMDGKIFRHTAWRECVRQAIGTR
DFDLMASNEATDDPLLVDYILSRMLPRRGITAKKEQVLITVGAQNAIWLAIELLTRAPLKAVCEDPCYPDTRQALSWCGA
DVTTVEVDQEGLPPDNIPMGVQAVFVTPSHHAPTGATMPLARRERLLELAQARDFIIVEDDYEFEMSFIEPPSPALKAID
KNQRVLYAGSFSKALFPGLRLGYLVGPEQVIAEARELRSMMLRHPPGHLQRTAAYFLAQGYYDLLIRDMRREFAKRRKAV
VEALARTDLEVAGSAQFGGTSLWVKAPDGTDTQTLAQDLLADGVVIEPGAPFFQGDNQPSEYFRLGYSSIPLEKIAKGVQ
LIAQRV

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=316, Percent_Identity=25.9493670886076, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI33469970, Length=316, Percent_Identity=25.9493670886076, Blast_Score=115, Evalue=1e-25,
Organism=Escherichia coli, GI1787710, Length=457, Percent_Identity=27.7899343544858, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1790797, Length=428, Percent_Identity=26.6355140186916, Blast_Score=123, Evalue=3e-29,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 54386; Mature: 54255

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPRIAAEVFFLDRASKRPLQTQIREAVVASILSKRAMPGSLMPSSRKLAHHLGVARMT
CCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VTLAFQELVDQGYLEARSRSGYSVADTDAIPRLPVGDATAHIENSTLWQKVLSENLRTRR
HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
RVIKPKDWRNMPYPFVFGEMDGKIFRHTAWRECVRQAIGTRDFDLMASNEATDDPLLVDY
HCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHH
ILSRMLPRRGITAKKEQVLITVGAQNAIWLAIELLTRAPLKAVCEDPCYPDTRQALSWCG
HHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHC
ADVTTVEVDQEGLPPDNIPMGVQAVFVTPSHHAPTGATMPLARRERLLELAQARDFIIVE
CCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
DDYEFEMSFIEPPSPALKAIDKNQRVLYAGSFSKALFPGLRLGYLVGPEQVIAEARELRS
CCCCEEEEEECCCCHHHHHCCCCCEEEEECCCHHHHCCCCHHHEEECHHHHHHHHHHHHH
MMLRHPPGHLQRTAAYFLAQGYYDLLIRDMRREFAKRRKAVVEALARTDLEVAGSAQFGG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
TSLWVKAPDGTDTQTLAQDLLADGVVIEPGAPFFQGDNQPSEYFRLGYSSIPLEKIAKGV
EEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
QLIAQRV
HHHHHCC
>Mature Secondary Structure 
AKPRIAAEVFFLDRASKRPLQTQIREAVVASILSKRAMPGSLMPSSRKLAHHLGVARMT
CCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VTLAFQELVDQGYLEARSRSGYSVADTDAIPRLPVGDATAHIENSTLWQKVLSENLRTRR
HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
RVIKPKDWRNMPYPFVFGEMDGKIFRHTAWRECVRQAIGTRDFDLMASNEATDDPLLVDY
HCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHH
ILSRMLPRRGITAKKEQVLITVGAQNAIWLAIELLTRAPLKAVCEDPCYPDTRQALSWCG
HHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHC
ADVTTVEVDQEGLPPDNIPMGVQAVFVTPSHHAPTGATMPLARRERLLELAQARDFIIVE
CCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
DDYEFEMSFIEPPSPALKAIDKNQRVLYAGSFSKALFPGLRLGYLVGPEQVIAEARELRS
CCCCEEEEEECCCCHHHHHCCCCCEEEEECCCHHHHCCCCHHHEEECHHHHHHHHHHHHH
MMLRHPPGHLQRTAAYFLAQGYYDLLIRDMRREFAKRRKAVVEALARTDLEVAGSAQFGG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
TSLWVKAPDGTDTQTLAQDLLADGVVIEPGAPFFQGDNQPSEYFRLGYSSIPLEKIAKGV
EEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
QLIAQRV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]