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The map label for this gene is ydhJ [C]

Identifier: 110678122

GI number: 110678122

Start: 731604

End: 732605

Strand: Direct

Name: ydhJ [C]

Synonym: RD1_0759

Alternate gene names: 110678122

Gene position: 731604-732605 (Clockwise)

Preceding gene: 110678119

Following gene: 110678149

Centisome position: 17.7

GC content: 57.88

Gene sequence:

>1002_bases
ATGGTCCGCAATATTTTTTTGGCCATCGTATCGTTCGCTCTTTCGGGCTGCAAAGAGGAAAACGAAACCGAGGTCACCCA
AGAACGTGTGCGCGCCATCAAGACTTACACCGTGACCGAACCTGCGAGCGGTGACATGCGCAGTTACTCTGCCACACTCG
TCGCCTCCGACACATCTGCGTTGAGTTTCTCTCTTACGGGCACCGTTGAAAGTGTGAACGTCACAGCCGGTGAAAAGGTA
TTGCGCGGCGACGTCCTTGCGACACTGGATAATCGTCCATTCGAGTTTGATCGCGACGCTGCCATGGCTGAACTCGTGAG
TGCACAAGCGCGTCGGGCAGAGAAACAGGCGGAGTTGGACCGTCAAAGCACACTTTTCGAAAGGGGCTGGGTTGCGCAGG
CGGCCCTGGATCAGGCGATTGCCGCCGCAGAAGGCGCGGATGCACAGCTGGATCTCGCAAGATCACGGCTGAGTACGGCA
GAACGCAATTTGAATAATGCGGTTCTGACCGCGCCCTTTGACGGTGTGGTCGCAAGCCGCGATGTCGATCCATTTCAGGA
TGTGCCAGCGGGGCAGGCGTTGTTTCAGCTAAACGCACAAGGCGCGCTTGAGATCGTCGCATCTGTGCCGGACGCCATGG
TCAGTCGCATTTTTCTTGGAACGACGGCTGACGTCAGTGTTCCAACCGTGGCGGGATGCGGATGCACTGCAAGGGCCATT
GAGATCGGACAGGCATCTGGGTCTGCAAACGCGGTGGAAATCCGCGCCGCCCTTTTGGATGGGCCCGCCGGGCTCATCCC
CGGTATGTCCGCAGAAATACAGATCACAGTGGAGAGCGCCTCAAGTGAAACCGGCTATCTGGTGCCCCTGACGGCCATCG
CGCCGGGTGACGAAAACGCCCCCGGTTATGTGTTCATTTTTGATCCTGCCGCACGCGTAGTTCGCAAAACACCGGTAAGG
GGCGCGGACACCGCGTTAAACAATCTGGTGAGCATCGTGTAG

Upstream 100 bases:

>100_bases
CTTTTGGACGCCAAGACAGACCTGTGGTGGACCGAACGCCCGTTGACCGCATTAACAGAGTTAGTGACCGCAGGAGCGGC
CAACTGGAGGTTGACCAAAA

Downstream 100 bases:

>100_bases
GGTGTTTCAGCCGGGGACGTCGTTGCGTCCGCCGGTGTCAGTTTTTTGCACGACGGGCAATCTGTGAAGCTATTGGGTGA
ATGAGGCCATGAACTTTGCA

Product: RND efflux membrane fusion protein, putative

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Secretion Protein HlyD; RND Efflux Membrane Fusion Protein; Transport/Efflux Transmembrane Protein; HlyD Family Secretion Protein; RND Efflux System Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Efflux Protein; Periplasmic Linker Protein; Multidrug Resistance Protein; Acriflavin Resistance Periplasmic Protein; NolF Secretion Protein; Nodulation Protein; AcrA/E Family Efflux Transporter MFP Subunit; Periplasmic Linker Protein Multidrug Resistance Protein; Lipoprotein; RND Membrane Fusion Protein; Multidrug Efflux Transporter Protein; Protein Secretion Protein; Component Of Multidrug Efflux System; Cation/Multidrug Efflux System Mebrane-Fusion Component; Efflux System Protein; Secretion Protein HlyD Family Protein; Multidrug ABC Transporter; Efflux Transmembrane Protein; Cation Efflux System Protein; Membrane Fusion Protein; Cation Efflux System; Macrolide-Specific Efflux Protein; Efflux Transporter; Secretion Protein; RND Efflux Transporter; Organic Solvent Efflux Pump; RND/Acr Family Transmembrane Transporter

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MVRNIFLAIVSFALSGCKEENETEVTQERVRAIKTYTVTEPASGDMRSYSATLVASDTSALSFSLTGTVESVNVTAGEKV
LRGDVLATLDNRPFEFDRDAAMAELVSAQARRAEKQAELDRQSTLFERGWVAQAALDQAIAAAEGADAQLDLARSRLSTA
ERNLNNAVLTAPFDGVVASRDVDPFQDVPAGQALFQLNAQGALEIVASVPDAMVSRIFLGTTADVSVPTVAGCGCTARAI
EIGQASGSANAVEIRAALLDGPAGLIPGMSAEIQITVESASSETGYLVPLTAIAPGDENAPGYVFIFDPAARVVRKTPVR
GADTALNNLVSIV

Sequences:

>Translated_333_residues
MVRNIFLAIVSFALSGCKEENETEVTQERVRAIKTYTVTEPASGDMRSYSATLVASDTSALSFSLTGTVESVNVTAGEKV
LRGDVLATLDNRPFEFDRDAAMAELVSAQARRAEKQAELDRQSTLFERGWVAQAALDQAIAAAEGADAQLDLARSRLSTA
ERNLNNAVLTAPFDGVVASRDVDPFQDVPAGQALFQLNAQGALEIVASVPDAMVSRIFLGTTADVSVPTVAGCGCTARAI
EIGQASGSANAVEIRAALLDGPAGLIPGMSAEIQITVESASSETGYLVPLTAIAPGDENAPGYVFIFDPAARVVRKTPVR
GADTALNNLVSIV
>Mature_333_residues
MVRNIFLAIVSFALSGCKEENETEVTQERVRAIKTYTVTEPASGDMRSYSATLVASDTSALSFSLTGTVESVNVTAGEKV
LRGDVLATLDNRPFEFDRDAAMAELVSAQARRAEKQAELDRQSTLFERGWVAQAALDQAIAAAEGADAQLDLARSRLSTA
ERNLNNAVLTAPFDGVVASRDVDPFQDVPAGQALFQLNAQGALEIVASVPDAMVSRIFLGTTADVSVPTVAGCGCTARAI
EIGQASGSANAVEIRAALLDGPAGLIPGMSAEIQITVESASSETGYLVPLTAIAPGDENAPGYVFIFDPAARVVRKTPVR
GADTALNNLVSIV

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34850; Mature: 34850

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNIFLAIVSFALSGCKEENETEVTQERVRAIKTYTVTEPASGDMRSYSATLVASDTSA
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHCEEEEEECCCCE
LSFSLTGTVESVNVTAGEKVLRGDVLATLDNRPFEFDRDAAMAELVSAQARRAEKQAELD
EEEEEECCEEEEEECCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RQSTLFERGWVAQAALDQAIAAAEGADAQLDLARSRLSTAERNLNNAVLTAPFDGVVASR
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEECC
DVDPFQDVPAGQALFQLNAQGALEIVASVPDAMVSRIFLGTTADVSVPTVAGCGCTARAI
CCCHHHCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCEECCCCCHHEE
EIGQASGSANAVEIRAALLDGPAGLIPGMSAEIQITVESASSETGYLVPLTAIAPGDENA
EEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCC
PGYVFIFDPAARVVRKTPVRGADTALNNLVSIV
CEEEEEECHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVRNIFLAIVSFALSGCKEENETEVTQERVRAIKTYTVTEPASGDMRSYSATLVASDTSA
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHCEEEEEECCCCE
LSFSLTGTVESVNVTAGEKVLRGDVLATLDNRPFEFDRDAAMAELVSAQARRAEKQAELD
EEEEEECCEEEEEECCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RQSTLFERGWVAQAALDQAIAAAEGADAQLDLARSRLSTAERNLNNAVLTAPFDGVVASR
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEECC
DVDPFQDVPAGQALFQLNAQGALEIVASVPDAMVSRIFLGTTADVSVPTVAGCGCTARAI
CCCHHHCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCEECCCCCHHEE
EIGQASGSANAVEIRAALLDGPAGLIPGMSAEIQITVESASSETGYLVPLTAIAPGDENA
EEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCC
PGYVFIFDPAARVVRKTPVRGADTALNNLVSIV
CEEEEEECHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA