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The map label for this gene is rmuC [H]

Identifier: 110678040

GI number: 110678040

Start: 645183

End: 646418

Strand: Direct

Name: rmuC [H]

Synonym: RD1_0663

Alternate gene names: 110678040

Gene position: 645183-646418 (Clockwise)

Preceding gene: 110678039

Following gene: 110678041

Centisome position: 15.61

GC content: 57.12

Gene sequence:

>1236_bases
ATGATCGAGTTTGCGGGACATACGATTGATCTCACGGACCCCGTTGTTCTGGCGGCAATGGGCGGCGGTGCTGTGGTTCT
GCTGATCCTTGTGCTGCTTGTGATGGCAGTGCGGGCGGCGGCGCGCTCGGCGAAATCGACCGAGCCTTTGATGCAGCAAT
TGGGTGTGTTGGGGCAGCATGTGCAGCATCTTTCGGCGGGTCAGGAACAGTTGCGCGGTGGTTTGCAGACGGTGTCGGAC
ACGCAGGCCAATGCGCAGACACAGGTGATACAAACGGTTGAGGCGCGCCTTGCCGCCGTGCAGCAGCAGATGCAGGATCG
GTTGGCGGACAACGCGATGCGCTCGCAGCGCGCATTGACCGATATGCAGGAACGCATGAAAGAAACGCTGCATGGCTCCA
GCAAGCAGACGACCACGTCCCTGACCCAGTTGCAGGAACGGCTGGCCTCCATCGACAAGGCGCAGGACAATATCACGAAA
CTATCCGGTGACGTATTGTCCTTGCAGGACATCCTCAGCAACAAACAAACGCGCGGTGCCTTTGGCGAAATCCAGCTGCA
CGATATCGTCTCCAAAGCGTTGCCGAACGACAGCTATGCCTTGCAGCATACTTTGAGCAATGGAAAACGCGCGGATTGCC
TGATCCATCTGCCAAACCCACCGGGCCCGATTGTGATCGACAGCAAATTCCCGCTGGAGGCTTACGAACAATTGCGCGCT
GCTAAAACGGAGTGGGACCTCAAAGACGCGGTTGCGAAAATGAAAACGGCCGTCACGAAACACATCAATGATATCTCTGA
AAAATACATCATTGAGGGCGAAACGGCGGATGGCGCGCTGATGTTTCTACCGTCCGAAGCCGTCTATGCTGAACTTCATT
CAAATTTCCCCGAACTTGTGCGCAAGGGGTTTGACGCGCGGGTCTGGATTGTTTCACCCACCACATGCATGGCGACGCTG
AACACGATGCGGGCCATTCTGAAAGACGCCAGAATGCGCGAACAGGCCGGTGCGATCCGCAAGACGCTCAAGATGTTGCA
CCGGGATGTGGAACTGGTTGTGGAACGGGTCGGCAAGCTGGACACGCATTTCAGGCAGGCGCAGCGTGACGTGCATGAAA
TCAGCACAGCAGCGGAACGCGCAGGCAAGCGCGCGGTCAAACTGGACAACTTCGACTTTGAGGAGTTGTCGCAGGAGGAT
GACAAGATCCTGCCCCTCACCCGCACTGAGGCTTGA

Upstream 100 bases:

>100_bases
GCGAGATGGAGGCGACGCCGCATTCCGGGCAATGCAACCATGGGCGGCCCACATATGTGGAACTCAAACTGTCCGACATC
GAACGCTTGTTTGGCCGCAC

Downstream 100 bases:

>100_bases
AGTGTGGCGCGAAATACCTGAAACACGCATTGCTGCCTGACATCAAAGGTTTCAACGCGTTACGTGATCTACGGGTATTG
CGTCAGACGCTCTAGGCCGC

Product: RmuC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MIEFAGHTIDLTDPVVLAAMGGGAVVLLILVLLVMAVRAAARSAKSTEPLMQQLGVLGQHVQHLSAGQEQLRGGLQTVSD
TQANAQTQVIQTVEARLAAVQQQMQDRLADNAMRSQRALTDMQERMKETLHGSSKQTTTSLTQLQERLASIDKAQDNITK
LSGDVLSLQDILSNKQTRGAFGEIQLHDIVSKALPNDSYALQHTLSNGKRADCLIHLPNPPGPIVIDSKFPLEAYEQLRA
AKTEWDLKDAVAKMKTAVTKHINDISEKYIIEGETADGALMFLPSEAVYAELHSNFPELVRKGFDARVWIVSPTTCMATL
NTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKLDTHFRQAQRDVHEISTAAERAGKRAVKLDNFDFEELSQED
DKILPLTRTEA

Sequences:

>Translated_411_residues
MIEFAGHTIDLTDPVVLAAMGGGAVVLLILVLLVMAVRAAARSAKSTEPLMQQLGVLGQHVQHLSAGQEQLRGGLQTVSD
TQANAQTQVIQTVEARLAAVQQQMQDRLADNAMRSQRALTDMQERMKETLHGSSKQTTTSLTQLQERLASIDKAQDNITK
LSGDVLSLQDILSNKQTRGAFGEIQLHDIVSKALPNDSYALQHTLSNGKRADCLIHLPNPPGPIVIDSKFPLEAYEQLRA
AKTEWDLKDAVAKMKTAVTKHINDISEKYIIEGETADGALMFLPSEAVYAELHSNFPELVRKGFDARVWIVSPTTCMATL
NTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKLDTHFRQAQRDVHEISTAAERAGKRAVKLDNFDFEELSQED
DKILPLTRTEA
>Mature_411_residues
MIEFAGHTIDLTDPVVLAAMGGGAVVLLILVLLVMAVRAAARSAKSTEPLMQQLGVLGQHVQHLSAGQEQLRGGLQTVSD
TQANAQTQVIQTVEARLAAVQQQMQDRLADNAMRSQRALTDMQERMKETLHGSSKQTTTSLTQLQERLASIDKAQDNITK
LSGDVLSLQDILSNKQTRGAFGEIQLHDIVSKALPNDSYALQHTLSNGKRADCLIHLPNPPGPIVIDSKFPLEAYEQLRA
AKTEWDLKDAVAKMKTAVTKHINDISEKYIIEGETADGALMFLPSEAVYAELHSNFPELVRKGFDARVWIVSPTTCMATL
NTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKLDTHFRQAQRDVHEISTAAERAGKRAVKLDNFDFEELSQED
DKILPLTRTEA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=367, Percent_Identity=22.0708446866485, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 45425; Mature: 45425

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFAGHTIDLTDPVVLAAMGGGAVVLLILVLLVMAVRAAARSAKSTEPLMQQLGVLGQH
CCEECCCEECCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VQHLSAGQEQLRGGLQTVSDTQANAQTQVIQTVEARLAAVQQQMQDRLADNAMRSQRALT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMQERMKETLHGSSKQTTTSLTQLQERLASIDKAQDNITKLSGDVLSLQDILSNKQTRGA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
FGEIQLHDIVSKALPNDSYALQHTLSNGKRADCLIHLPNPPGPIVIDSKFPLEAYEQLRA
CCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHH
AKTEWDLKDAVAKMKTAVTKHINDISEKYIIEGETADGALMFLPSEAVYAELHSNFPELV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCHHHHHHHHCCHHHHH
RKGFDARVWIVSPTTCMATLNTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKL
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTHFRQAQRDVHEISTAAERAGKRAVKLDNFDFEELSQEDDKILPLTRTEA
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEFAGHTIDLTDPVVLAAMGGGAVVLLILVLLVMAVRAAARSAKSTEPLMQQLGVLGQH
CCEECCCEECCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VQHLSAGQEQLRGGLQTVSDTQANAQTQVIQTVEARLAAVQQQMQDRLADNAMRSQRALT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMQERMKETLHGSSKQTTTSLTQLQERLASIDKAQDNITKLSGDVLSLQDILSNKQTRGA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
FGEIQLHDIVSKALPNDSYALQHTLSNGKRADCLIHLPNPPGPIVIDSKFPLEAYEQLRA
CCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHH
AKTEWDLKDAVAKMKTAVTKHINDISEKYIIEGETADGALMFLPSEAVYAELHSNFPELV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCHHHHHHHHCCHHHHH
RKGFDARVWIVSPTTCMATLNTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKL
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTHFRQAQRDVHEISTAAERAGKRAVKLDNFDFEELSQEDDKILPLTRTEA
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]