Click here to switch to the map view.

The map label for this gene is 110677998

Identifier: 110677998

GI number: 110677998

Start: 601916

End: 602656

Strand: Direct

Name: 110677998

Synonym: RD1_0619

Alternate gene names: NA

Gene position: 601916-602656 (Clockwise)

Preceding gene: 110677997

Following gene: 110677999

Centisome position: 14.56

GC content: 59.51

Gene sequence:

>741_bases
ATGGCGCGACAGACAGACATCGTATTGATCCTCGGCAGCGGGCCCAACGCACCACAGGCCGAGGCGTGGCCGCGCGGCTG
GTTCGACCGGATTGTTGCGATCAACAACGCATGGCGGATCAGAGAAGACTGGGACGATCTGGTCTTTCCAGAGGATTTTC
CCGAGGACCGGCGACCACAAAGCATCCTGCCATCCCAGCGGTTTGTTCAGGCGGATCAATTCGTACCGGCGCAAAACGCC
TATGGCGGTTTTGTCTATGCGGGCGGCACGATGGCTTTCACAACGGCCTATTGGGCCTTGCAGGCGCTGCGACCCAAGGT
GATGGCGTTTCTGGGCTGTGACATGGTCTATCCTAAAGCTGGCCCGACCCATTTTTACGGAACAGGTGCCGCTGATCCGC
TGCGCCCGGATATCACCCTGCAGGATTTAGGTGCAAAATCAGCGCGTTTGGGCATGTTTGCTGCGGCGCAGGGCTGTCGC
TGCGTGAACCTGTCATCTGATCCGAGCAAGTTGATGTATCAGCGGGCAAACCCCGATGCGCTGCGCGACACTGTGTTGGG
TTTGCCGGATGTCACAGGCATGGGCGCACTGCTGAAGCGCGAGGATGATCTGGGCTATTTCGTTGCCACGGGGCGCTATT
GGGAAAGAGACTTCGGGTTTGATGCGCAGGGACTGGCAGCGCTTGATGCATCCTGGCGCGCGCTGTGGTCCGAGGGATCC
GGCATTACATGCGCTGCGTAA

Upstream 100 bases:

>100_bases
AGGTTCGGGTTCTTGAGGAACAGGATTAAGGCAAGACCGTCTTGCCACCGCCTGATCCGGGGCTAACTTCTGCACTTCCC
AACGGCAGACGGCGACGGTT

Downstream 100 bases:

>100_bases
CAATGTGTTTCCCAAGCTGTTATTGAATTGTCGCAATCATATTGCTAGATTTGAGATACACCCAGCGACCGGGGTCTGGC
GGCGCATCTTAAGGAGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MARQTDIVLILGSGPNAPQAEAWPRGWFDRIVAINNAWRIREDWDDLVFPEDFPEDRRPQSILPSQRFVQADQFVPAQNA
YGGFVYAGGTMAFTTAYWALQALRPKVMAFLGCDMVYPKAGPTHFYGTGAADPLRPDITLQDLGAKSARLGMFAAAQGCR
CVNLSSDPSKLMYQRANPDALRDTVLGLPDVTGMGALLKREDDLGYFVATGRYWERDFGFDAQGLAALDASWRALWSEGS
GITCAA

Sequences:

>Translated_246_residues
MARQTDIVLILGSGPNAPQAEAWPRGWFDRIVAINNAWRIREDWDDLVFPEDFPEDRRPQSILPSQRFVQADQFVPAQNA
YGGFVYAGGTMAFTTAYWALQALRPKVMAFLGCDMVYPKAGPTHFYGTGAADPLRPDITLQDLGAKSARLGMFAAAQGCR
CVNLSSDPSKLMYQRANPDALRDTVLGLPDVTGMGALLKREDDLGYFVATGRYWERDFGFDAQGLAALDASWRALWSEGS
GITCAA
>Mature_245_residues
ARQTDIVLILGSGPNAPQAEAWPRGWFDRIVAINNAWRIREDWDDLVFPEDFPEDRRPQSILPSQRFVQADQFVPAQNAY
GGFVYAGGTMAFTTAYWALQALRPKVMAFLGCDMVYPKAGPTHFYGTGAADPLRPDITLQDLGAKSARLGMFAAAQGCRC
VNLSSDPSKLMYQRANPDALRDTVLGLPDVTGMGALLKREDDLGYFVATGRYWERDFGFDAQGLAALDASWRALWSEGSG
ITCAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27040; Mature: 26909

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQTDIVLILGSGPNAPQAEAWPRGWFDRIVAINNAWRIREDWDDLVFPEDFPEDRRPQ
CCCCCCEEEEECCCCCCCCCCCCCCHHHHHEEEECCCEEECCCCCCCCCCCCCCCCCCCH
SILPSQRFVQADQFVPAQNAYGGFVYAGGTMAFTTAYWALQALRPKVMAFLGCDMVYPKA
HCCCHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
GPTHFYGTGAADPLRPDITLQDLGAKSARLGMFAAAQGCRCVNLSSDPSKLMYQRANPDA
CCCCEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEECCCCHHHHHEECCCCHH
LRDTVLGLPDVTGMGALLKREDDLGYFVATGRYWERDFGFDAQGLAALDASWRALWSEGS
HHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHCCCC
GITCAA
CEEECC
>Mature Secondary Structure 
ARQTDIVLILGSGPNAPQAEAWPRGWFDRIVAINNAWRIREDWDDLVFPEDFPEDRRPQ
CCCCCEEEEECCCCCCCCCCCCCCHHHHHEEEECCCEEECCCCCCCCCCCCCCCCCCCH
SILPSQRFVQADQFVPAQNAYGGFVYAGGTMAFTTAYWALQALRPKVMAFLGCDMVYPKA
HCCCHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
GPTHFYGTGAADPLRPDITLQDLGAKSARLGMFAAAQGCRCVNLSSDPSKLMYQRANPDA
CCCCEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEECCCCHHHHHEECCCCHH
LRDTVLGLPDVTGMGALLKREDDLGYFVATGRYWERDFGFDAQGLAALDASWRALWSEGS
HHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHCCCC
GITCAA
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA